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lines changed Original file line number Diff line number Diff line change @@ -14,9 +14,10 @@ install.packages("ggparty")
1414
1515### Testing the package
1616
17- Obtain a single-cell dataset for testing (** UPDATE LINK ** ) and run scGate to filter a specific cell type
17+ Obtain a single-cell dataset for testing (e.g. sample datasets included with the package ) and run scGate to filter a specific cell type
1818```
19- test.set <- readRDS(ADD_LINK)
19+ sample.sets <- scGate::get_testing_data(version = 'hsa.latest')
20+ test.set <- sample.sets[[1]]
2021
2122#Load scGate and upload a database of models
2223library(scGate)
@@ -49,11 +50,11 @@ scGate::plot.tree(scGate::plot_tree(my.model)
4950
5051### Demos and tutorials
5152
52- Add this section
53+ Coming soon
5354
5455### References
5556
56- Add references
57+ Coming soon
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