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Package: deMULTIplex
Type: Package
Title: deMULTIplex is a software suite for MULTI-seq sample barcode FASTQ pre-processing and cell barcode classification.
Version: 1.0.2
Author: Chris McGinnis
Imports: stringdist, ShortRead, KernSmooth, reshape2, Rtsne
Maintainer: Chris McGinnis <chris.mcginnis@ucsf.edu>
Description: 'deMULTIplex' is an R package for analyzing single-cell RNA sequencing data generated with the MULTI-seq sample multiplexing method. Package includes software to (1) Convert raw MULTI-seq sample barcode library FASTQs into a sample barcode UMI count matrix, and (2) Classify cell barcodes into sample barcode groups. For more information, see our pre-print: https://www.biorxiv.org/content/10.1101/387241v1.
License: CC-0
Encoding: UTF-8
LazyData: true