Added to scripts ReadME and formatting NO_JIRA

Author: Alex-AMC

assets/search.gif

@@ -2,17 +2,41 @@
 
 This folder contains scripts submitted by users or CCDC scientists for anyone to use freely. 
 
-### Hydrogen bond propensity : 
-- Writes a .docx report of a hydrogen bond propensity calculation for any given mol2/refcode.
+### Hydrogen bond propensity
+- Writes a `.docx report` of a hydrogen bond propensity calculation for any given `.mol2`/refcode.
 
-### Multi-component hydrogen bond propensity: 
+### Multi-component hydrogen bond propensity 
 - Performs a multi-component HBP calculation for a given library of co-formers. 
 
-### Packing similarity dendrogram:
+### Packing similarity dendrogram
 - Construct a dendrogram for an input set of structures based on packing-similarity analysis.
 
 ### GOLD-multi
 - Use the CSD Docking API and the multiprocessing module to parallelize GOLD docking.
 
+### Find Binding Conformation
+- Generates idealized conformers for ligands and evaluates their RMSD to the conformation in the PDB.
+
+### Concat Mol2
+- Concatenates mol2 files present in working directory to a single `.mol2` file. 
+
+### Create CASTEP Input
+- Creates input files (`.cell` and `.param`) files for a given compound through Mercury.
+
+### Create GAUSSIAN Input
+- Create GAUSSIAN input file (`.gjf`) for a given CSD refcode or `.mol2` file.
+
 ## Tips 
-### Searching tips:
+A section for top tips in using the repository and GitHub. 
+### Searching tips:
+
+The search bar in GitHub allows you to search for keywords mentioned in any file throughout the repository (in the main branch).
+
+It is also possible to filter which file type you are interested in.
+
+For example: 
+"hydrogen bond" 
+
+<img src="../assets/search.gif" width="500px">
+
+

scripts/ReadMe.md

@@ -16,7 +16,7 @@ Requires user to add script to Mercury interface.
 
 - CSD-Core
 
-If you wish to run CASTEP, you will need to acquire a licence for CASTEP, this is not supplied by the CCDC.
+If you wish to run CASTEP, you will need to acquire a license for CASTEP, this is not supplied by the CCDC.
 
 ## Instructions on running