Add non-local state constraints for bond creation

[jkrajniak]

New optional reaction condition.
Let consider a pair P,Q that is considered to be bonded. P and Q belong to two residues R1, R2, both composed of four particles (p1,p2,p3,p4). The optional condition should allow declaring that the reaction could happen only if the particle in residue R1 is in particular chemical state.

Problems:

1. The chemical state is a property of the particle. Although the topology manager keeps track on the residues and particles but to access chemical state, we have to get the particle object from the Storage. It could happen that the particle will not be on the same CPU like P or Q particles.
   One of the solutions is to keep chemical state accessible from any place by TopologyManager.