Can't locate Bio/SeqIO.pm

[DMHe98]

$ getMutationType.pl -h
Can't locate Bio/SeqIO.pm in @inc (@inc contains: /public/home/dmhe_gibh/soft/czplib /public/home/dmhe_gibh/perl5/lib/perl5/x86_64-linux-thread-multi /public/home/dmhe_gibh/perl5/lib/perl5 /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at /public/home/dmhe_gibh/soft/czplib/Sequence.pm line 19.
BEGIN failed--compilation aborted at /public/home/dmhe_gibh/soft/czplib/Sequence.pm line 19.
Compilation failed in require at /public/home/dmhe_gibh/soft/CTK/getMutationType.pl line 9.
BEGIN failed--compilation aborted at /public/home/dmhe_gibh/soft/CTK/getMutationType.pl line 9.

[suvrajitm]

Hello, it seems like you are not running the command within the CTK conda environment. Once you properly install CTK via anaconda, you should be able to just run the command "getMutationType.pl" , it will show you the function arguments etc. Please follow the CTK installation procedure: https://zhanglab.c2b2.columbia.edu/index.php/CTK_Documentation#Installation