docker compose up fails consistently with a sqlalchemy error during db initialization #3634
Closed as duplicate of#3548
Description
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Description:
docker compose up doesn't result in a running system on Fedora 43 consistently on both the release and main branches. The augur container dies consistently with a database error.
The first error appears to be
sqlalchemy.exc.ProgrammingError: (psycopg2.errors.UndefinedTable) relation "contributor_repo" does not exist
which then results also:
augur-1 | sqlalchemy.exc.ProgrammingError: (psycopg2.errors.UndefinedTable) relation "augur_operations.config" does not exist
augur-1 | LINE 2: FROM augur_operations.config
augur-1 | ^
augur-1 |
augur-1 | [SQL: SELECT augur_operations.config.id AS augur_operations_config_id, augur_operations.config.section_name AS augur_operations_config_section_name, augur_operations.config.setting_name AS augur_operations_config_setting_name, augur_operations.config.value AS augur_operations_config_value, augur_operations.config.type AS augur_operations_config_type
augur-1 | FROM augur_operations.config
augur-1 | WHERE augur_operations.config.section_name = %(section_name_1)s AND augur_operations.config.setting_name = %(setting_name_1)s]
augur-1 | [parameters: {'section_name_1': 'Redis', 'setting_name_1': 'cache_group'}]
This appeared multiple times on different systems during ChaossCon
How to reproduce:
- run
docker compose up
Log files
Software versions:
- Augur:
mainorreleasebranch - OS: Fedora 43
- Browser: n/a