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TestPullImagePlus.java
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199 lines (163 loc) · 5.9 KB
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import org.junit.jupiter.api.Test;
import ij.ImagePlus;
import ij.process.ImageProcessor;
import net.clesperanto.imagej.ImageJConverters;
import net.clesperanto.core.ArrayJ;
import net.clesperanto.core.DeviceJ;
import net.clesperanto.core.MemoryJ;
import static org.junit.jupiter.api.Assertions.*;
import java.util.concurrent.ThreadLocalRandom;
public class TestPullImagePlus {
public final static int MAX_UINT16 = 65536;
public final static int MAX_INT16 = 65536 / 2 - 1;
public final static int MAX_UINT8 = 256;
public final static int MAX_INT8 = 256 / 2 - 1;
@Test
public void testPullFloat() {
float[] flatVals = new float[18];
for (int i = 0; i < flatVals.length; i++)
flatVals[i] = ThreadLocalRandom.current().nextFloat();
DeviceJ device = DeviceJ.getDefaultDevice();
ArrayJ in = MemoryJ.makeFloatBuffer(device, new long[] { 3, 3, 2 }, "buffer");
MemoryJ.writeFloatBuffer(in, flatVals, 18);
ImagePlus outputImp = ImageJConverters.copyArrayJToImagePlus(in);
int c = 0;
for (int z = 0; z < 2; z++) {
outputImp.setPositionWithoutUpdate(1, 1 + z, 1);
ImageProcessor outIp = outputImp.getProcessor();
for (int y = 0; y < 3; y++) {
for (int x = 0; x < 3; x++) {
assertEquals(flatVals[c++], outIp.getPixelValue(x, y));
}
}
}
}
@Test
public void testPullInt() {
int[] flatVals = new int[18];
for (int i = 0; i < flatVals.length; i++)
flatVals[i] = ThreadLocalRandom.current().nextInt();
DeviceJ device = DeviceJ.getDefaultDevice();
ArrayJ in = MemoryJ.makeIntBuffer(device, new long[] { 3, 3, 2 }, "buffer");
MemoryJ.writeIntBuffer(in, flatVals, 18);
ImagePlus outputImp = ImageJConverters.copyArrayJToImagePlus(in);
int c = 0;
for (int z = 0; z < 2; z++) {
outputImp.setPositionWithoutUpdate(1, 1 + z, 1);
ImageProcessor outIp = outputImp.getProcessor();
for (int y = 0; y < 3; y++) {
for (int x = 0; x < 3; x++) {
assertEquals(flatVals[c++], outIp.getPixelValue(x, y));
}
}
}
}
@Test
public void testPullUint() {
int[] flatVals = new int[18];
for (int i = 0; i < flatVals.length; i++)
flatVals[i] = Integer.MAX_VALUE + ThreadLocalRandom.current().nextInt(0,
100);
DeviceJ device = DeviceJ.getDefaultDevice();
ArrayJ in = MemoryJ.makeUIntBuffer(device, new long[] { 3, 3, 2 }, "buffer");
MemoryJ.writeUIntBuffer(in, flatVals, 18);
ImagePlus outputImp = ImageJConverters.copyArrayJToImagePlus(in);
int c = 0;
for (int z = 0; z < 2; z++) {
outputImp.setPositionWithoutUpdate(1, 1 + z, 1);
ImageProcessor outIp = outputImp.getProcessor();
for (int y = 0; y < 3; y++) {
for (int x = 0; x < 3; x++) {
assertEquals(flatVals[c++], outIp.getPixelValue(x, y));
}
}
}
}
@Test
public void testPullShort() {
short[] flatVals = new short[18];
for (int i = 0; i < flatVals.length; i++)
flatVals[i] = (short) ThreadLocalRandom.current().nextInt(Short.MIN_VALUE,
Short.MAX_VALUE + 1);
DeviceJ device = DeviceJ.getDefaultDevice();
ArrayJ in = MemoryJ.makeShortBuffer(device, new long[] { 3, 3, 2 }, "buffer");
MemoryJ.writeShortBuffer(in, flatVals, 18);
ImagePlus outputImp = ImageJConverters.copyArrayJToImagePlus(in);
int c = 0;
for (int z = 0; z < 2; z++) {
outputImp.setPositionWithoutUpdate(1, 1 + z, 1);
ImageProcessor outIp = outputImp.getProcessor();
for (int y = 0; y < 3; y++) {
for (int x = 0; x < 3; x++) {
float val = outIp.getPixelValue(x, y);
assertEquals(flatVals[c++], val > MAX_INT16 ? val - MAX_UINT16 : val);
}
}
}
}
// @Test
// public void testPullUshort() {
// short[] flatVals = new short[18];
// for (int i = 0; i < flatVals.length; i++)
// flatVals[i] = (short) ThreadLocalRandom.current().nextInt(0, MAX_UINT16);
// DeviceJ device = DeviceJ.getDefaultDevice();
// ArrayJ in = MemoryJ.makeUShortBuffer(device, new long[] { 3, 3, 2 },
// "buffer");
// MemoryJ.writeUShortBuffer(in, flatVals, 18);
// ImagePlus outputImp = ImageJConverters.copyArrayJToImagePlus(in);
// int c = 0;
// for (int z = 0; z < 2; z++) {
// outputImp.setPositionWithoutUpdate(1, 1 + z, 1);
// ImageProcessor outIp = outputImp.getProcessor();
// for (int y = 0; y < 3; y++) {
// for (int x = 0; x < 3; x++) {
// short val = flatVals[c++];
// assertEquals(val < 0 ? MAX_UINT16 + val : val, outIp.getPixelValue(x, y));
// }
// }
// }
// }
// @Test
// public void testPullByte() {
// byte[] flatVals = new byte[18];
// for (int i = 0; i < flatVals.length; i++)
// flatVals[i] = (byte) ThreadLocalRandom.current().nextInt(Byte.MIN_VALUE,
// Byte.MAX_VALUE + 1);
// DeviceJ device = DeviceJ.getDefaultDevice();
// ArrayJ in = MemoryJ.makeByteBuffer(device, new long[] {3, 3, 2}, "buffer");
// MemoryJ.writeByteBuffer(in, flatVals, 18);
// ImagePlus outputImp = ImageJConverters.copyArrayJToImagePlus(in);
// int c = 0;
// for (int z = 0; z < 2; z ++) {
// outputImp.setPositionWithoutUpdate(1, 1 + z, 1);
// ImageProcessor outIp = outputImp.getProcessor();
// for (int y = 0; y < 3; y ++) {
// for (int x = 0; x < 3; x ++) {
// float val = outIp.getPixelValue(x, y);
// assertEquals(flatVals[c ++], val > MAX_INT8 ? val - MAX_UINT8 : val);
// }
// }
// }
// }
// @Test
// public void testPullUbyte() {
// byte[] flatVals = new byte[18];
// for (int i = 0; i < flatVals.length; i++)
// flatVals[i] = (byte) ThreadLocalRandom.current().nextInt(0, MAX_UINT8);
// DeviceJ device = DeviceJ.getDefaultDevice();
// ArrayJ in = MemoryJ.makeUByteBuffer(device, new long[] {3, 3, 2}, "buffer");
// MemoryJ.writeUByteBuffer(in, flatVals, 18);
// ImagePlus outputImp = ImageJConverters.copyArrayJToImagePlus(in);
// int c = 0;
// for (int z = 0; z < 2; z ++) {
// outputImp.setPositionWithoutUpdate(1, 1 + z, 1);
// ImageProcessor outIp = outputImp.getProcessor();
// for (int y = 0; y < 3; y ++) {
// for (int x = 0; x < 3; x ++) {
// byte val = flatVals[c ++];
// assertEquals(val < 0 ? MAX_UINT8 + val: val, outIp.getPixelValue(x, y));
// }
// }
// }
// }
}