Upgraded most of the dependencies

The tests pass.

Ran

lein source-deps :prefix-exclusions "[\"classlojure\"]"
lein with-profile +plugin.mranderson/config test
lein with-profile +1.8,+plugin.mranderson/config test
lein with-profile +1.9,+plugin.mranderson/config test

and they all passed without an issue.

Author: dotemacs

project.clj

@@ -3,34 +3,34 @@
   :url "http://github.com/clojure-emacs/refactor-nrepl"
   :license {:name "Eclipse Public License"
             :url "http://www.eclipse.org/legal/epl-v10.html"}
-  :dependencies [[org.clojure/tools.nrepl "0.2.12"]
-                 ^:source-dep [http-kit "2.1.19"]
-                 ^:source-dep [cheshire "5.4.0"]
-                 ^:source-dep [clojure-emacs/alembic "0.3.3"]
-                 ^:source-dep [org.clojure/tools.analyzer.jvm "0.6.9"]
+  :dependencies [[org.clojure/tools.nrepl "0.2.13"]
+                 ^:source-dep [http-kit "2.2.0"]
+                 ^:source-dep [cheshire "5.7.1"]
+                 ^:source-dep [alembic "0.3.2"]
+                 ^:source-dep [org.clojure/tools.analyzer.jvm "0.7.1"]
                  ^:source-dep [org.clojure/tools.namespace  "0.3.0-alpha3"]
-                 ^:source-dep [org.clojure/tools.reader "1.0.0-beta4"]
-                 ^:source-dep [org.clojure/java.classpath "0.2.2"]
+                 ^:source-dep [org.clojure/tools.reader "1.0.0"]
+                 ^:source-dep [org.clojure/java.classpath "0.2.3"]
                  ^:source-dep [lein-cljfmt "0.3.0"]
                  ^:source-dep [me.raynes/fs "1.4.6"]
                  ^:source-dep [rewrite-clj "0.6.0"]
-                 ^:source-dep [cljs-tooling "0.1.7"]
+                 ^:source-dep [cljs-tooling "0.2.0"]
                  ^:source-dep [version-clj "0.1.2"]]
   :plugins [[thomasa/mranderson "0.4.7"]]
   :filespecs [{:type :bytes :path "refactor-nrepl/refactor-nrepl/project.clj" :bytes ~(slurp "project.clj")}]
-  :profiles {:provided {:dependencies [[cider/cider-nrepl "0.10.0"]
+  :profiles {:provided {:dependencies [[cider/cider-nrepl "0.14.0"]
                                        [org.clojure/clojure "1.7.0"]]}
-             :test {:dependencies [[print-foo "1.0.1"]]
+             :test {:dependencies [[print-foo "1.0.2"]]
                     :src-paths ["test/resources"]}
              :1.8 {:dependencies [[org.clojure/clojure "1.8.0"]]}
              :1.9 {:dependencies [[org.clojure/clojure "1.9.0-alpha14"]
-                                  [org.clojure/clojurescript "1.9.293"]]}
+                                  [org.clojure/clojurescript "1.9.660"]]}
              :dev {:plugins [[jonase/eastwood "0.2.0"]]
                    :global-vars {*warn-on-reflection* true}
                    :dependencies [[org.clojure/clojurescript "1.7.48"]
-                                  [com.cemerick/piggieback "0.2.1"]
-                                  [leiningen-core "2.5.3"]
-                                  [commons-io/commons-io "2.4"]]
+                                  [com.cemerick/piggieback "0.2.2"]
+                                  [leiningen-core "2.7.1"]
+                                  [commons-io/commons-io "2.5"]]
                    :repl-options {:nrepl-middleware [cemerick.piggieback/wrap-cljs-repl]}
                    :java-source-paths ["test/java"]
                    :resource-paths ["test/resources"