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change pyclowder2 -> pyclowder
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Dockerfile

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@@ -22,7 +22,7 @@ RUN apt-get -q -q update \
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&& pip install --upgrade setuptools \
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&& rm -rf /var/lib/apt/lists/* /tmp/get-pip.py
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# instal pyclowder2
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# instal pyclowder
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COPY pyclowder /tmp/pyclowder/pyclowder
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COPY setup.py description.rst /tmp/pyclowder/
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README.md

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@@ -12,17 +12,17 @@ create new extractors.
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## Setup
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Install pyClowder2 on your system by cloning this repo:
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Install pyClowder on your system by cloning this repo:
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```
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git clone https://opensource.ncsa.illinois.edu/bitbucket/scm/cats/pyclowder2.git
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cd pyclowder2
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git clone https://opensource.ncsa.illinois.edu/bitbucket/scm/cats/pyclowder.git
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cd pyclowder
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pip install -r requirements.txt
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python setup.py install
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```
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or directly from Bitbucket:
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```
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pip install -r https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/pyclowder2/raw/requirements.txt git+https://opensource.ncsa.illinois.edu/bitbucket/scm/cats/pyclowder2.git
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pip install -r https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/pyclowder/raw/requirements.txt git+https://opensource.ncsa.illinois.edu/bitbucket/scm/cats/pyclowder.git
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```
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## Example Extractor

description.rst

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@@ -14,12 +14,12 @@ Use the following command to install::
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Because this system is still under rapid development, you may want to
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install by cloning the repo using the following commands::
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git clone https://opensource.ncsa.illinois.edu/bitbucket/scm/cats/pyclowder2.git
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cd pyclowder2
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git clone https://opensource.ncsa.illinois.edu/bitbucket/scm/cats/pyclowder.git
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cd pyclowder
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pip install -r requirements.txt
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python setup.py install
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Or you can install directly from NCSA's Bitbucket::
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pip install -r https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/pyclowder2/raw/requirements.txt git+https://opensource.ncsa.illinois.edu/bitbucket/scm/cats/pyclowder2.git
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pip install -r https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/pyclowder/raw/requirements.txt git+https://opensource.ncsa.illinois.edu/bitbucket/scm/cats/pyclowder.git
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sample-extractors/README.md

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* wordcount: A simple extractor that takes a text file and counts the number of characters, words and lines.
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* echo: A simple extractor that shows how check_message can be used to tell the extractor not to download the actual file.
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* wordcount-simpleextractor: this is wordcount extractor which uses the power of new added module simpleextractor in Pyclowder2.
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* wordcount-simpleextractor: this is wordcount extractor which uses the power of new added module simpleextractor in Pyclowder.
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Additional files in this folder are:
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* example.conf: an example of the ubuntu upstart file

sample-extractors/simple-extractor/README.md

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needs to be wrapped as an extractor as quickly as possible.
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2. This extractor CURRENTLY outputs JSON format metadata or a list of preview files. If your extractor generates
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any additional information like generated files, datasets, collections, thumbnails, etc., this method cannot be use and
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you have to write your extractor the normal way using [PyClowder2](https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/pyclowder2/browse)
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you have to write your extractor the normal way using [PyClowder](https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/pyclowder/browse)
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3. [Docker](https://www.docker.com/) is the recommended way of developing / wrapping your code using the Simple Extractor.
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## Steps for Writing an Extractor Using the Simple Extractor

sample-extractors/simple-r-extractor/README.md

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```
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Once the image with the extractor is build you can test this extractor in the clowder environment. To do this you will
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need to start clowder first. This can be done using a single [docker-compose file](https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/pyclowder2/raw/docker-compose.yml).
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need to start clowder first. This can be done using a single [docker-compose file](https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/pyclowder/raw/docker-compose.yml).
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You can start the full clowder stack using `docker-compose up -p clowder` in the same folder where you downloaded the
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docker-compose file. After some time you will have an instance of clowder running that you can access using:
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http://localhost:9000/ (if you use docker with virtualbox the url will probably be http://192.168.99.100:9000/).

setup.py

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url='https://clowder.ncsa.illinois.edu',
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project_urls={
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'Source': 'https://opensource.ncsa.illinois.edu/bitbucket/scm/cats/pyclowder2.git',
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'Source': 'https://opensource.ncsa.illinois.edu/bitbucket/scm/cats/pyclowder.git',
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},
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license='BSD',
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classifiers=[
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'Development Status :: 4 - Beta',
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'Intended Audience :: Science/Research',
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'License :: OSI Approved :: BSD License',
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'Programming Language :: Python :: 2.7'
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'Programming Language :: Python :: 2',
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'Programming Language :: Python :: 3'
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],
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keywords=['clowder', 'data management system'],
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