Refactor module names to avoid function/module name clashes

- Renamed:
  - `clone.py`       → `repository_clone.py`
  - `ingest.py`      → `repository_ingest.py`
  - `ingest_from_query.py` → `query_ingestion.py`
  - `parse_query.py` → `query_parser.py`
- Updated import statements accordingly in package `__init__.py`

Author: filipchristiansen

README.md

@@ -104,9 +104,9 @@ If you are hosting it on a domain, you can specify the allowed hostnames via env
 - [tiktoken](https://github.com/openai/tiktoken) - Token estimation
 - [apianalytics.dev](https://www.apianalytics.dev/) - Simple Analytics
 
-###  Looking for a javascript/node package?
+### Looking for a javascript/node package?
 
-Check out the NPM alternative 📦 Repomix: https://github.com/yamadashy/repomix
+Check out the NPM alternative 📦 Repomix: <https://github.com/yamadashy/repomix>
 
 ## ✔️ Contributing to Gitingest
 
@@ -176,4 +176,3 @@ The application should be available at `http://localhost:8000`
    ```bash
    gitingest --help
    ```
-

src/gitingest/__init__.py

@@ -1,8 +1,8 @@
 """ gitingest: A package for ingesting data from git repositories. """
 
-from gitingest.clone import clone_repo
-from gitingest.ingest import ingest
-from gitingest.ingest_from_query import ingest_from_query
-from gitingest.parse_query import parse_query
+from gitingest.query_ingestion import ingest_from_query
+from gitingest.query_parser import parse_query
+from gitingest.repository_clone import clone_repo
+from gitingest.repository_ingest import ingest
 
 __all__ = ["ingest_from_query", "clone_repo", "parse_query", "ingest"]

src/gitingest/cli.py

@@ -4,8 +4,8 @@
 
 import click
 
-from gitingest.ingest import ingest
-from gitingest.ingest_from_query import MAX_FILE_SIZE
+from gitingest.query_ingestion import MAX_FILE_SIZE
+from gitingest.repository_ingest import ingest
 
 
 @click.command()

src/gitingest/ingest_from_query.py src/gitingest/query_ingestion.pysrc/gitingest/ingest_from_query.py renamed to src/gitingest/query_ingestion.py

@@ -5,9 +5,9 @@
 import shutil
 
 from config import TMP_BASE_PATH
-from gitingest.clone import CloneConfig, clone_repo
-from gitingest.ingest_from_query import ingest_from_query
-from gitingest.parse_query import parse_query
+from gitingest.query_ingestion import ingest_from_query
+from gitingest.query_parser import parse_query
+from gitingest.repository_clone import CloneConfig, clone_repo
 
 
 def ingest(

src/gitingest/parse_query.py src/gitingest/query_parser.pysrc/gitingest/parse_query.py renamed to src/gitingest/query_parser.py

@@ -7,9 +7,9 @@
 from starlette.templating import _TemplateResponse
 
 from config import EXAMPLE_REPOS, MAX_DISPLAY_SIZE
-from gitingest.clone import CloneConfig, clone_repo
-from gitingest.ingest_from_query import ingest_from_query
-from gitingest.parse_query import parse_query
+from gitingest.query_ingestion import ingest_from_query
+from gitingest.query_parser import parse_query
+from gitingest.repository_clone import CloneConfig, clone_repo
 from server_utils import Colors, log_slider_to_size
 
 templates = Jinja2Templates(directory="templates")

src/gitingest/clone.py src/gitingest/repository_clone.pysrc/gitingest/clone.py renamed to src/gitingest/repository_clone.py

@@ -1,10 +1,10 @@
-""" Tests for the clone module. """
+""" Tests for the repository_clone module. """
 
 from unittest.mock import AsyncMock, patch
 
 import pytest
 
-from gitingest.clone import CloneConfig, _check_repo_exists, clone_repo
+from gitingest.repository_clone import CloneConfig, _check_repo_exists, clone_repo
 
 
 @pytest.mark.asyncio

src/gitingest/ingest.py src/gitingest/repository_ingest.pysrc/gitingest/ingest.py renamed to src/gitingest/repository_ingest.py

@@ -1,9 +1,9 @@
-""" Tests for the ingest_from_query module """
+""" Tests for the query_ingestion module """
 
 from pathlib import Path
 from typing import Any
 
-from gitingest.ingest_from_query import _extract_files_content, _scan_directory
+from gitingest.query_ingestion import _extract_files_content, _scan_directory
 
 
 def test_scan_directory(temp_directory: Path, sample_query: dict[str, Any]) -> None: