Merge pull request #244 from coding-for-reproducible-research/improve-your-r-code-material

Improve your r code material Integration into website

Author: liamjberrisford

_config.yml

@@ -84,3 +84,10 @@ execute:
       - 'individual_modules/introduction_to_julia/performant_code.ipynb'
       - 'individual_modules/introduction_to_julia/variables.ipynb'
       - 'individual_modules/introduction_to_julia/visualisation.ipynb'
+      - 'individual_modules/improve_your_r_code/introduction.ipynb'
+      - 'individual_modules/improve_your_r_code/style.ipynb'
+      - 'individual_modules/improve_your_r_code/microbenchmark.ipynb'
+      - 'individual_modules/improve_your_r_code/vectorisation.ipynb'
+      - 'individual_modules/improve_your_r_code/data_table.ipynb'
+      - 'individual_modules/improve_your_r_code/parallelisation.ipynb'
+      - 'individual_modules/improve_your_r_code/rcpp.ipynb'

_toc.yml

@@ -31,6 +31,7 @@ parts:
                   - file: programme_information/intermediate_regression_analysis_with_r
                   - file: programme_information/advanced_regression_analysis_with_r
                   - file: programme_information/working_with_data_in_r
+                  - file: programme_information/improve_your_r_code
               - file: programme_information/unix
                 sections:
                   - file: programme_information/intro_to_unix
@@ -146,7 +147,6 @@ parts:
                   - file: individual_modules/introduction_to_machine_learning/2_model_selection
                   - file: individual_modules/introduction_to_machine_learning/3_pipeline_task
                   - file: individual_modules/introduction_to_machine_learning/4_unsupervised_learning
-                  
           - file: course_homepages/R
             sections:
               - file: individual_modules/section_landing_pages/introduction_to_r
@@ -185,6 +185,14 @@ parts:
                   - file: individual_modules/working_with_data_in_R/reshaping_datasets
                   - file: individual_modules/working_with_data_in_R/strings_and_dates
                   - file: individual_modules/working_with_data_in_R/summary
+              - file: individual_modules/section_landing_pages/improve_your_r_code
+                sections:
+                  - file: individual_modules/improve_your_r_code/style
+                  - file: individual_modules/improve_your_r_code/microbenchmark
+                  - file: individual_modules/improve_your_r_code/vectorisation
+                  - file: individual_modules/improve_your_r_code/data_table
+                  - file: individual_modules/improve_your_r_code/parallelisation
+                  - file: individual_modules/improve_your_r_code/rcpp
           - file: course_homepages/unix
             sections:
               - file: individual_modules/section_landing_pages/introduction_to_unix

individual_modules/improve_your_r_code/LICENSE.txt

@@ -0,0 +1,60 @@
+
+### Instructional Material
+
+The instructional material in this course is copyright © 2024 University of Exeter
+and is made available under the Creative Commons Attribution 4.0 International
+licence (https://creativecommons.org/licenses/by/4.0/). Instructional material
+consists of material that is contained within the "individual_modules/introduction_to_julia" directory, and images folders in
+this directory, with the exception of code snippets and example programs found
+in files within these folders. Such code snippets and example programs are
+considered software for the purposes of this licence. 
+
+
+### Software
+
+Except where otherwise noted, software provided in this repository is made
+available under the MIT licence (https://opensource.org/licenses/MIT).
+
+Copyright © 2024 University of Exeter
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+The software in this repository is adapted from software that is covered by the
+following copyright and permission notice:
+
+    Copyright © 2024 Software Carpentry
+
+    Permission is hereby granted, free of charge, to any person obtaining
+    a copy of this software and associated documentation files (the
+    "Software"), to deal in the Software without restriction, including
+    without limitation the rights to use, copy, modify, merge, publish,
+    distribute, sublicense, and/or sell copies of the Software, and to
+    permit persons to whom the Software is furnished to do so, subject to
+    the following conditions:
+
+    The above copyright notice and this permission notice shall be
+    included in all copies or substantial portions of the Software.
+
+    THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+    EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+    MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+    NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
+    LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
+    OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
+    WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.