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| 1 | + |
| 2 | +The following are the registered attendees for HARMONY 2026, as of 2026-01-17 05:28 UTC. |
| 3 | + |
| 4 | +| Name | Affiliation | Attendance | Interests | |
| 5 | +|:---|:---|:---|:---| |
| 6 | +| Alan Garny | University of Auckland | In person | CellML, COMBINE Archive, Multicellular Modelling, OMEX Metadata, SED-ML | |
| 7 | +| Augustin Luna | National Library of Medicine | Remotely | BioPAX, SBGN; sbgn.org; pathwaycommons.org | |
| 8 | +| Ayesha Abubakr | St. John's Kilmarnock School | Remotely | BioPAX, CellML, Multicellular Modelling, NeuroML, SBML, SBOL and SBOL Visual, SED-ML; Exploring drug-like molecules for inhibition of overexpressed NSCLC integrins using in-silico methods to identify, optimize, and dock ligands. Researching the use of bacteriophages in combination with synthetic peptides as monoclonal antibodies. | |
| 9 | +| Chris Myers | University of Colorado Boulder | In person | COMBINE Archive, SBML, SBOL and SBOL Visual, SED-ML; SynBioHub, iBioSim, SynBioSuite | |
| 10 | +| David Nickerson | Auckland Bioengineering Institute, University of Auckland | In person | CellML, COMBINE Archive, Multicellular Modelling, OMEX Metadata, SED-ML, PE-TAB, repositories; model publishing | |
| 11 | +| Eric Young | WPI | In person | SBOL and SBOL Visual; I have developed Prymetime, a sequencing assembly pipeline that can accurately assemble genetic engineering signatures and detect them in microbiomes. https://github.com/emyounglab/prymetime | |
| 12 | +| Falk Schreiber | University of Konstanz | In person | SBGN, SBML, SBOL and SBOL Visual; Vanted (www.vanted.org), SBGN-ED (www.sbgn-ed.org) | |
| 13 | +| Frank T. Bergmann | BioQUANT, Heidelberg University | In person | COMBINE Archive, SBGN, SBML, SED-ML, PE-TAB, FROG; https://copasi.org: Analysis Tool, Model Editor / Simulation engine, for biochemical networks. https://basico.rtfd.io: A simplified python interface to COPASI. http://copasijs.rtfd.io/: JavaScript version, exposing simulation capabilities of COPASI. | |
| 14 | +| Goksel Misirli | Keele University | Remotely | Multicellular Modelling, OMEX Metadata, SBGN, SBML, SBOL and SBOL Visual | |
| 15 | +| Gonzalo Vidal | University of Colorado Boulder | Remotely | SBOL and SBOL Visual; SeqTrainer. Python package to train ML models on SBOL data. | |
| 16 | +| Hoda Rahimi | The University of Auckland | Remotely | BioPAX, CellML, COMBINE Archive, Multicellular Modelling, OMEX Metadata, SBGN, SBML, SED-ML, PE-TAB | |
| 17 | +| Hugh Sorby | Auckland Bioengineering Institute | In person | CellML, SED-ML | |
| 18 | +| Jarrah Dowrick | Auckland Bioengineering Institute | In person | CellML, COMBINE Archive, OMEX Metadata, SBGN, SED-ML, FieldML; Graphical interface to couple CellML models together: https://github.com/physiomelinks/phlynx | |
| 19 | +| Koray Atalag | Auckland Bioengineering Institute | Remotely | health data interoperability (FHIR, openEHR, SNOMED, LOINC, ICD etc.); Digital Twins on FHIR | |
| 20 | +| Leo Willyanto Santoso | Auckland Bioengineering Institute, The University of Auckland | Remotely | CellML; Semantic annotation of computational biological model | |
| 21 | +| Litian Su | Auckland Bioengineering Institute | Remotely | CellML, SBML; I'm involved in the computational fluid dynamics of gastric inflows. | |
| 22 | +| Lucian Smith | University of Washington | In person | COMBINE Archive, Multicellular Modelling, OMEX Metadata, SBML, SED-ML, FROG; Antimony (https://github.com/sys-bio/antimony/) is a human-readable, human-writable model definition language that translates to SBML since 2008. It's used in Tellurium (https://github.com/sys-bio/tellurium/), our lab's simulation environment. | |
| 23 | +| Lutz Brusch | TU Dresden, Germany | Remotely | Multicellular Modelling, SBML, PE-TAB, OpenVT, MultiCellML, MorpheusML; Multicellular modeling, https://MultiCellML.org, MorpheusML, https://morpheus.gitlab.io, SBML-Spatial, PEtab-MS, https://gitlab.com/fitmulticell/fit | |
| 24 | +| Marc Molla Garcia | UPF | In person | BioPAX, CellML, COMBINE Archive, Multicellular Modelling, NeuroML, OMEX Metadata, SBGN, SBML, SBOL and SBOL Visual, SED-ML, PE-TAB, FROG | |
| 25 | +| Maria Chiara Langella | University of Naples Federico II | Remotely | BioPAX, CellML, COMBINE Archive, Multicellular Modelling, SBML, SBOL and SBOL Visual, PE-TAB | |
| 26 | +| Matthias König | Humboldt-Universität zu Berlin, Faculty of Life Sciences, Department of Biology, Institute of Theoretical Biology, Systems Medicine of the Liver; University of Stuttgart, Institute of Structural Mechanics and Dynamics in Aerospace Engineering | Remotely | CellML, COMBINE Archive, Multicellular Modelling, OMEX Metadata, SBGN, SBML, SED-ML, PE-TAB, FROG | |
| 27 | +| MORETTI Sébastien | SIB Swiss Institute of Bioinformatics | Remotely | BioPAX, SBGN, SBML; MetaNetX | |
| 28 | +| N/A | University at Buffalo | Remotely | | |
| 29 | +| Pedro T. Monteiro | IST - University of Lisbon | Remotely | Multicellular Modelling, SBML, SED-ML, FROG; CoLoMoTo, GINsim, EpiLog, Yeastract | |
| 30 | +| Triana Karnadipa | ABI | Remotely | COMBINE Archive, NeuroML, OMEX Metadata; My PhD project combines movement-specific brain atlases and lesion radiomics to predict post-stroke upper-limb recovery, improving accuracy and interpretability beyond whole-brain models. | |
| 31 | +| Weiwei Ai | Auckland Bioengineering Institute, University Of Auckland | In person | CellML, SED-ML, PE-TAB | |
| 32 | +| Xiaoming Hu | Bioquant, University Heidelberg | In person | SBML, Data Management, Ro-Crate; FAIRDOM-SEEK is an open-source, web-based platform for FAIR research data management, enabling storage, cataloguing, sharing, and publication of research outputs using the ISA framework, with support for metadata, versioning, and DOI creation. | |
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