add missing tests

Author: mr-c

conformance_tests.yaml

@@ -1430,7 +1430,7 @@
   doc: Test empty writable dir with InitialWorkDirRequirement inside Docker
   tags: [ inline_javascript, initial_work_dir ]
 
-- job: tests/dynresreq-job.json
+- job: tests/dynresreq-job.yaml
   tool: tests/dynresreq.cwl
   doc: Test dynamic resource reqs referencing inputs
   output:
@@ -1523,7 +1523,7 @@
   output: {}
   tags: [ required ]
 
-- job: tests/dynresreq-job.json
+- job: tests/dynresreq-job.yaml
   doc: Test simple workflow with a dynamic resource requirement
   tool: tests/dynresreq-workflow.cwl
   output:

run_test.sh

@@ -116,16 +116,4 @@ fi
 
 echo
 
-if [[ $failures != 0 ]]; then
-    echo "$failures tool tests failed"
-else
-    if [[ $runs == 0 ]]; then
-        echo >&2 "$helpmessage"
-        echo >&2
-        exit 1
-    else
-        echo "All tool tests succeeded"
-    fi
-fi
-
 exit $failures

tests/Hello.java

@@ -0,0 +1 @@
+public class Hello {}

tests/any-type-compat.cwl

@@ -0,0 +1,22 @@
+cwlVersion: v1.1.0-dev1
+class: Workflow
+
+steps: []
+inputs:
+  input1:
+    type: Any
+  input2:
+    type: Any[]
+  input3:
+    type: Any
+
+outputs:
+  - id: output1
+    type: string[]
+    outputSource: input1
+  - id: output2
+    type: string[]
+    outputSource: input2
+  - id: output3
+    type: string
+    outputSource: input3

tests/any-type-job.json

@@ -0,0 +1,5 @@
+{
+  "input1": ["hello", "world"],
+  "input2": ["foo", "bar"],
+  "input3": "hello"
+}

tests/arguments-job.yml

@@ -0,0 +1,3 @@
+src:
+  class: File
+  path: Hello.java

tests/array-of-strings-job.yml

@@ -0,0 +1,5 @@
+array_input:
+  - class: File
+    path: ./hello.txt
+  - class: File
+    path: ./hello.2.txt

tests/basename-fields-job.yml

@@ -0,0 +1,5 @@
+cwlVersion: v1.0
+tool:
+  class: File
+  path: echo-tool.cwl  # could have been any file, this isn't a secret CWL feature :-)
+

tests/basename-fields-test.cwl

@@ -0,0 +1,33 @@
+cwlVersion: v1.1.0-dev1
+class: Workflow
+
+requirements:
+  - class: StepInputExpressionRequirement
+
+inputs:
+  tool: File
+
+outputs:
+  rootFile:
+    type: File
+    outputSource: root/out
+  extFile:
+    type: File
+    outputSource: ext/out
+
+steps:
+  root:
+    run: echo-file-tool.cwl
+    in:
+      tool: tool
+      in:
+        valueFrom: $(inputs.tool.nameroot)
+    out: [out]
+  ext:
+    run: echo-file-tool.cwl
+    in:
+      tool: tool
+      in:
+        valueFrom: $(inputs.tool.nameext)
+    out: [out]
+

tests/bool-empty-inputbinding-job.json

@@ -0,0 +1,3 @@
+{
+  "flag": true
+}