spelling: check YAML docs

Author: mr-c

.github/config/spellcheck.yml

@@ -17,5 +17,6 @@ matrix:
       ignores:
       - :matches(code, pre)
   sources:
-  - '**/*.md'
+  - '!env*/**|**/*.md'
+  - '!env*/**|!tests/**|*.yml'
   default_encoding: utf-8

.github/config/wordlist.txt

@@ -1,49 +1,107 @@
 acyclic
 amstutz
+arrayschema
 arvados
 auditability
 avro
 backchannel
 backrub
+basecommand
 basedir
+basename
+basetypesdoc
+bioconda
+bioinformatics
 bnf
 bogdan
+bowtie
+changelog
 checkpoint
 checkpointing
+checksums
 chilton
 cisphobia
 classname
+cmd
+commandinputarrayschema
+commandinputenumschema
+commandinputparameter
+commandinputrecordfield
+commandinputrecordschema
+commandinputschema
+commandlinebindable
+commandlinebinding
 commandlinetool
+commandlinetooldoc
 commandlinetools
+commandoutputarrayschema
+commandoutputbinding
+commandoutputenumschema
+commandoutputparameter
+commandoutputrecordfield
+commandoutputrecordschema
 commonwl
+contrib
 complextype
+coresMin
 coreutils
+cpus
+crossproduct
+cryptographic
 ctbrown
 curii
-curoverse
 cwl
 cwltest
 cwltool
+cwltype
 cwlversion
 cyclic
 dataflow
 dev
+dirent
+docafter
+docchild
+dockerfile
+dockerimport
+dockerload
+dockeroutputdirectory
+dockerpull
 dockerrequirement
+documentroot
+docparent
+doi
+dotproduct
 doubleq
 dsl
 dusenbery
 edu
 eg
+enablereuse
+entryname
+enum
+enumschema
+entrypoint
+envdef
+environmentdef
+envname
+envvalue
 envvarrequirement
 expressionlib
+expressionplaceholder
 expressiontool
+expressiontooloutputparameter
 expressiontools
+fieldbase
+filenameABCDEFG
 filesystem
 freedesktop
 gavrilovic
+geoscience
 ghose
 gitter
+globbing
 gmail
+gunzip
 hervé
 https
 iana
@@ -55,24 +113,48 @@ implementors
 initialworkdirrequirement
 initialworkdirrequirements
 inlinejavascriptrequirement
+inplaceupdate
 inplaceupdaterequirement
+inputarrayschema
+inputenumschema
+inputbinding
+inputformat
+inputrecordfield
+inputrecordschema
 inputparameter
+inputschema
 institut
+interoperable
 invocab
+ioschema
+ipv
 iri
+itemseparator
 jmchilton
 json
+jsonldpredicate
 junit
 kaushik
+kib
 ld
 lexicographically
 linkmerge
+linkmergemethod
+loadcontents
+loadlisting
+loadlistingenum
+loadlistingrequirement
+localhost
 lookahead
+loopback
 maccallum
 macos
+mappredicate
+mapsubject
 mebibyte
 mebibytes
 ménager
+metacharacters
 metaschema
 misgendering
 mrc
@@ -85,43 +167,79 @@ nebojša
 nekrutenko
 networkaccess
 neuro
+nolinkcheck
 onlinepubs
 opengroup
+operationinputparameter
+operationoutputparameter
 orcid
 osx
+outputarrayschema
+outputbinding
+outputenumschema
+outputeval
+outputformat
+outputschema
 outputsource
+outputparameter
+outputrecordfield
+outputrecordschema
+pathname
 petermac
 pickvalue
+pickvaluemethod
 posix
 pre
 preprocess
 preprocessed
 preprocessing
+primitivetype
+processrequirement
 psu
 publically
 pvanheus
 rdf
+rdfs
+recordfield
+recordschema
 recurse
+refscope
 repo
 reproducibility
+resolvers
 resourcerequirement
 routable
+rrid
 runtime
+saladversion
 sbgenomics
 scatterfeaturerequirement
+scattermethod
 schemadefrequirement
 schemaorg
 schemas
+scr
 secondaryfiles
+secondaryfileschema
 secondaryfilesdsl
+semver
 shellcommandrequirement
 singleq
+sld
+specializeto
+specializefrom
 softwarepackage
 softwarerequirement
 soiland
+stderr
+stdin
+stdout
 stepinputexpressionrequirement
 stian
+streamable
+subdirectories
 subdirectory
+subnet
 subprocess
 subprocesses
 subscope
@@ -133,24 +251,45 @@ substrings
 subtype
 subtypes
 subworkflow
+subworkflows
+subworkflowfeaturerequirement
 subworkflowrequirement
 superset
 svg
+symlink
+tbb
+testcase
 tijanic
 tijanić
+timelimit
 toc
 tooltimelimit
 transcode
 txt
+typedef
+typedsl
 uc
 ucdavis
+udocker
+underspecified
 untrusted
+updatable
 uri
 utf
+valuefrom
 vandewege
 virtualenv
+virtualized
 walkthrough
 wdl
 whitespace
+workflowdoc
+workflowinputparameter
+workflowoutputparameter
+workflowstep
+workflowstepinput
+workflowstepoutput
+workreuse
 xdg
 yaml
+yml

CODE_OF_CONDUCT.md

@@ -102,7 +102,6 @@ As a stop gap measure until a more formal governance structure is adopted, the
 following individuals make up the leadership of the CWL Project: Peter Amstutz,
 John Chilton, Michael R. Crusoe, and Nebojša Tijanić.
 
-To report an issue with anyone on the team you can escalate to Ward Vandewege
- (Curoverse) [email protected], Anton Nekrutenko (Galaxy)
+To report an issue with anyone on the team you can escalate to Anton Nekrutenko (Galaxy)
 anton AT bx DOT psu DOT edu, C. Titus Brown (UC Davis) [email protected], or
 Brandi Davis-Dusenbery (Seven Bridges Genomics) [email protected].

CommandLineTool.yml

@@ -1115,7 +1115,7 @@ $graph:
     Modify the behavior of CommandLineTool to generate a single string
     containing a shell command line.  Each item in the `arguments` list must
     be joined into a string separated by single spaces and quoted to prevent
-    intepretation by the shell, unless `CommandLineBinding` for that argument
+    interpretation by the shell, unless `CommandLineBinding` for that argument
     contains `shellQuote: false`.  If `shellQuote: false` is specified, the
     argument is joined into the command string without quoting, which allows
     the use of shell metacharacters such as `|` for pipes.