Merge pull request #176 from tom-tan/add-record-order-test

Add conformance test for sorting record fields (inputBinding for all levels)

Author: tom-tan

conformance_tests.yaml

@@ -3541,6 +3541,14 @@
     Use of $(runtime.outdir) for outputBinding glob.
   tags: [ required, command_line_tool ]
 
+- tool: tests/record-order.cwl
+  job: tests/record-order-job.json
+  output:
+    args: [-a, -b, '1', -c, '3', -d, -e, '2', -f, '4']
+  label: record-order-with-input-bindings
+  doc: Test sorting arguments at each level (inputBinding for all levels)
+  tags: [ command_line, required ]
+
 - label: output_reference_workflow_input
   output: {
     "last": "me"
@@ -3571,5 +3579,4 @@
   doc: >-
     Test SchemaDefRequirement with a workflow, with the `$import` under types.
     It is similar to schemadef-wf, but the `$import` is different.
-  tags: [ workflow, schema_def ]
-
+  tags: [ workflow, schema_def ]

tests/record-order-job.json

@@ -0,0 +1,10 @@
+{
+    "a": {
+      "b": 1,
+      "c": 3
+    },
+    "d": {
+      "e": 2,
+      "f": 4
+    }
+}

tests/record-order.cwl

@@ -0,0 +1,55 @@
+class: CommandLineTool
+cwlVersion: v1.2
+
+baseCommand: python
+inputs:
+  - id: args.py
+    type: File
+    default:
+      class: File
+      location: args.py
+    inputBinding:
+      position: -1
+  - id: a
+    type:
+      type: record
+      fields:
+        - name: b
+          type: int
+          inputBinding:
+            position: 1
+            prefix: -b
+        - name: c
+          type: int
+          inputBinding:
+            position: 3
+            prefix: -c
+    inputBinding:
+      position: 5
+      prefix: -a
+  - id: d
+    type:
+      type: record
+      fields:
+        - name: e
+          type: int
+          inputBinding:
+            position: 2
+            prefix: -e
+        - name: f
+          type: int
+          inputBinding:
+            position: 4
+            prefix: -f
+    inputBinding:
+      position: 6
+      prefix: -d
+outputs:
+  - id: args
+    type:
+      type: array
+      items: string
+
+hints:
+  - class: DockerRequirement
+    dockerPull: docker.io/python:3-slim