Avoid deleting cached output

keysmashes · keysmashes · commit 1b660e050ab3 · 2018-09-07T11:24:53.000+01:00
diff --git a/cwltool/executors.py b/cwltool/executors.py
@@ -97,7 +97,7 @@ def execute(self,
                 path_mapper=runtime_context.path_mapper)
 
         if runtime_context.rm_tmpdir:
-            cleanIntermediate(self.output_dirs)
+            cleanIntermediate(filter(lambda x: x != runtime_context.cachedir, self.output_dirs))
 
         if self.final_output and self.final_status:
 
