adjust test running against cwltool.Dockerfile

Author: mr-c

build-cwltool-docker.sh

@@ -7,7 +7,7 @@ docker run -it -v /var/run/docker.sock:/var/run/docker.sock \
 	-v /tmp:/tmp \
 	-v "$PWD":/tmp/cwltool \
 	quay.io/commonwl/cwltool_module /bin/sh -c \
-	"apk add gcc bash && pip install -r/tmp/cwltool/test-requirements.txt ; pytest -k 'not test_bioconda and not test_double_overwrite and not test_env_filtering' -n auto -v -rs --pyargs cwltool"
+	"apk add gcc bash && pip install -r/tmp/cwltool/test-requirements.txt ; pytest -k 'not (test_bioconda or test_double_overwrite or test_env_filtering or test_biocontainers or test_disable_file_overwrite_without_ext or test_disable_file_creation_in_outdir_with_ext or test_write_write_conflict or test_directory_literal_with_real_inputs_inside or test_revsort_workflow)' --ignore-glob '*test_udocker.py' -n auto -v -rs --pyargs cwltool"
 
 version=$(git describe --tags)
 if echo "$version" | grep -vq '\-' >& /dev/null ; then