Use builder.outdir (container) not passed in outdir (host).

Peter Amstutz · Peter Amstutz · commit ba22034f504f · 2019-05-03T13:57:37.000-04:00
diff --git a/cwltool/command_line_tool.py b/cwltool/command_line_tool.py
@@ -677,8 +677,8 @@ def collect_output(self,
                             globpatterns.extend(aslist(gb))
 
                     for gb in globpatterns:
-                        if gb.startswith(outdir):
-                            gb = gb[len(outdir) + 1:]
+                        if gb.startswith(builder.outdir):
+                            gb = gb[len(builder.outdir) + 1:]
                         elif gb == ".":
                             gb = outdir
                         elif gb.startswith("/"):
