Releases: common-workflow-language/cwltool
Hello Python 3.9, goodbye Python 3.5!
Fix algorithm for generating output names when output names clash (#1342) by @pvanheus
allow pytest version 6 and other build cleanups (#1345) by @mr-c
Drop support/testing/CI for Python 3.5 (#1346) by @mr-c
Python 3.9 testing (#1352) by @mr-c
- upgrade to mypy 0.790
Singularity: Support both --userns error messages (#1350) by @jonathanxu18
(also removes --pid when using --userns with Signularity, for better Singularity in Kubernetes support)
Now supports the ratified and release vrsion of CWL v1.2
Support CWL v1.2.0-dev5
The road to CWL 1.2
cwltool 3.0.20200530110633 CWL v1.2.0-dev3 , mypyc support, and more!
Fixed typo in docker.py #1269 by @hknust
Support CWL v1.2.0 dev3 ("only_non_null" -> "the_only_non_null") #1273 by @mr-c
Allow specification of file object in sec expression #1233 by @illusional
cope with unmovable files left over from Docker+IWDR #1282 by @mr-c
Remove schema_salad mention from tox.ini #1288 by @mr-c
Use schema_salad.avro.schema.Name according to docs #1281 by @rupertnash
Restore udocker feature #1293 by @mr-c
Upgrade to new mypy; get codebase compatible with mypyc #1294 by @mr-c
Rework types to use "Any" less often #1299 by @mr-c
cwltool 3.0.20200324120055 small tweaks to support toil-cwl-runner
cwltool 3.0.20200317203547: Conditionals, abstract operations, v1.2-dev2 and more!
Conditionals! #1222 @tetron
abstract operation #1255 @tetron
Use non-flat badges with the commonwl icon for conformance badges #1244 @tom-tan
Add doc field message to the output of --help #1248 @tom-tan
docker: change from --volume to --mount #1251 @mccalluc
explain who provides cwltool #1245 @mr-c
Update fragments in index #1256 @tetron
Ensure pack() produces original documents, not internally updated #1259 @tetron
Add test for packing a fragment of a document & fix. #1261 @tetron
Bump to 1.2.0-dev2 #1262 @tetron