update changelog and correct some @SInCE markers

Author: mr-c

CHANGELOG.md

@@ -3,6 +3,29 @@
 
 ## v1.4.6 [Unreleased]
 
+User visible changes
+- Should be none
+
+Operations changes:
+- Unused RO Bundles and Git repositories are now deleted in case of errors,
+  instead of filling up the disk with unusable files
+- Temporary directories older than 1 day are now cleared via a daily cron job
+  See `src/main/resources/application.properties` for configuration
+
+Minor changes:
+- mockito-all was replaced by mockito-inline as it supports mocking static
+  methods
+
+Dependecies upgrade:
+- Bump jackson from 2.13.4 to 2.14.1
+- Bump spring-data-commons from 2.7.3 to 2.7.6
+- Bump hibernate-types-55 from 2.19.2 to 2.21.1
+- Bump liquibase-core from 4.16.1 to 4.18.0
+- Bump snakeyaml-engine from 2.4 to 2.5
+- Bump common-compress from 1.21 to 1.22
+- Bump junit-jupiter from 1.17.4 to 1.17.6
+- Bump postgresql from 1.17.4 to 1.17.6
+
 ## v1.4.5 [2022-09-30]
 
 User visible changes

src/main/java/org/commonwl/view/Scheduler.java

@@ -94,7 +94,7 @@ public void removeOldQueuedWorkflowEntries() {
      * <p>Errors logged through Logger. Settings in Spring application properties
      * file.</p>
      *
-     * @since 1.4.5
+     * @since 1.4.6
      */
     @Scheduled(cron = "${cron.clearTmpDir}")
     public void clearTmpDir() {
@@ -110,7 +110,7 @@ public void clearTmpDir() {
      * For a given temporary directory, scans it (not recursively) for files and
      * directories exceeding the age limit threshold.
      *
-     * @since 1.4.5
+     * @since 1.4.6
      * @see <a href="https://commons.apache.org/proper/commons-io/apidocs/org/apache/commons/io/filefilter/AgeFileFilter.html">https://commons.apache.org/proper/commons-io/apidocs/org/apache/commons/io/filefilter/AgeFileFilter.html</a>
      * @param temporaryDirectory temporary directory
      */

src/main/java/org/commonwl/view/util/FileUtils.java

@@ -15,7 +15,7 @@
  * <p>Uses other utilities, such as Apache Commons IO's {@code FileUtils}, but
  * with refinements specific for CWL Viewer (e.g. handling Git repositories).</p>
  *
- * @since 1.4.5
+ * @since 1.4.6
  */
 public class FileUtils {
 
@@ -29,7 +29,7 @@ private FileUtils() {}
      *
      * @param repo Git repository object
      * @throws IOException if it fails to delete the Git repository directory
-     * @since 1.4.5
+     * @since 1.4.6
      */
     public static void deleteGitRepository(Git repo) throws IOException {
         if (
@@ -68,7 +68,7 @@ public static void deleteGitRepository(Git repo) throws IOException {
      *
      * @param bundle A bundle object
      * @throws IOException if it fails to delete the bundle temporary directory
-     * @since 1.4.5
+     * @since 1.4.6
      */
     public static void deleteBundleTemporaryDirectory(Bundle bundle) throws IOException {
         // The RoBundleService#saveToFile call will delegate to Apache Taverna's
@@ -109,7 +109,7 @@ public static void deleteBundleTemporaryDirectory(Bundle bundle) throws IOExcept
      *
      * @param bundle A bundle object
      * @throws IOException if it fails to delete the bundle temporary directory
-     * @since 1.4.5
+     * @since 1.4.6
      */
     public static void deleteBundleParentDirectory(Bundle bundle) throws IOException {
         if (bundle != null) {

src/test/java/org/commonwl/view/util/FileUtilsTest.java

@@ -28,7 +28,7 @@
 /**
  * Tests for <code>FileUtils</code>.
  *
- * @since 1.4.5
+ * @since 1.4.6
  */
 public class FileUtilsTest {