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shorten link to file-formats.bam
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setup.cfg

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@@ -32,7 +32,8 @@ packages = find_namespace:
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include_package_data = True
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python_requires = >=3.6
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install_requires =
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cwl_runner
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cwltool
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cwlref-runner
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cwl-utils==0.*
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myst-parser==0.*
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pydata-sphinx-theme==0.*

src/topics/file-formats.md

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@@ -42,8 +42,8 @@ parameterization.
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:name: sample.yml
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```
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___Note:___ To follow the example below, you need to download the example input file, *file-formats.bam*. The file is available from [https://github.com/common-workflow-language/user_guide/raw/main/_includes/cwl/file-formats/file-formats.bam
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](https://github.com/common-workflow-language/user_guide/raw/main/_includes/cwl/file-formats/file-formats.bam) and can be downloaded e.g. via `wget`:
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___Note:___ To follow the example below, you need to download the example input file, *file-formats.bam*. The file is available from <https://github.com/common-workflow-language/user_guide/raw/main/_includes/cwl/file-formats/file-formats.bam>
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and can be downloaded e.g. via `wget`:
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```{code-block}
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$ wget https://github.com/common-workflow-language/user_guide/raw/main/_includes/cwl/file-formats/file-formats.bam

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