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lines changed Original file line number Diff line number Diff line change @@ -19,7 +19,8 @@ type-checking when creating parameter files.
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For file formats, we recommend referencing existing ontologies (like EDAM in
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our example), reference a local ontology for your institution, or do not add
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a file format initially for quick development before sharing your tool with
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- others.
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+ others. You can browse existing file format listings for IANA [ here] [ IANA ] and
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+ for EDAM [ here] [ EDAM ] .
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Note that for added value ` cwltool ` can do some basic reasoning based on file
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formats and warn you if there seem to be some obvious mismatches.
@@ -66,3 +67,6 @@ Final process status is success
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}
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}
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```
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+ [ IANA ] : https://www.iana.org/assignments/media-types/media-types.xhtml
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+ [ EDAM ] : http://www.ebi.ac.uk/ols/ontologies/edam/terms?iri=http%3A%2F%2Fedamontology.org%2Fformat_1915
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