includes cleaned

Author: salva24

src/cart_cell.cc

@@ -20,25 +20,13 @@
  */
 
 #include "cart_cell.h"
-#include <cstdint>
-#include <stdexcept>
-#include <string>
-#include "core/container/math_array.h"
-#include "core/functor.h"
-#include "core/interaction_force.h"
-#include "core/real_t.h"
-#include "core/resource_manager.h"
-#include "core/functor.h"
-#include "hyperparams.h"
-#include "tumor_cell.h"
-#include "core/container/math_array.h"
-#include "core/interaction_force.h"
-#include "core/real_t.h"
-#include "core/resource_manager.h"
 #include "hyperparams.h"
 #include "tumor_cell.h"
 #include "utils_aux.h"
+#include <algorithm>
 #include <cstdint>
+#include <stdexcept>
+#include <string>
 
 namespace bdm {
 

src/cart_tumor.cc

@@ -19,7 +19,9 @@
  * for the compiler-research.org organization.
  */
 #include "cart_tumor.h"
-#include "cart_cell.h"
+#include <iostream>
+#include <memory>
+#include <vector>
 #include "core/environment/uniform_grid_environment.h"
 #include "core/operation/mechanical_forces_op.h"
 #include "diffusion_thomas_algorithm.h"

src/diffusion_thomas_algorithm.cc

@@ -20,10 +20,11 @@
  */
 #include "diffusion_thomas_algorithm.h"
 #include "cart_cell.h"
-#include "core/resource_manager.h"
-#include "core/simulation.h"
 #include "hyperparams.h"
 #include "tumor_cell.h"
+#include <string>
+#include <utility>
+#include <vector>
 
 namespace bdm {
 

src/diffusion_thomas_algorithm.h

@@ -22,8 +22,10 @@
 #ifndef DIFFUSION_THOMAS_ALGORITHM_H_
 #define DIFFUSION_THOMAS_ALGORITHM_H_
 
-#include <utility>
+#include "biodynamo.h"
 #include "core/diffusion/diffusion_grid.h"
+#include <string>
+#include <vector>
 
 namespace bdm {
 

src/forces_tumor_cart.cc

@@ -20,10 +20,11 @@
  */
 
 #include "forces_tumor_cart.h"
-#include "core/operation/mechanical_forces_op.h"
 #include "hyperparams.h"
 #include "tumor_cell.h"
 #include "utils_aux.h"
+#include <algorithm>
+#include <cmath>
 
 namespace bdm {
 

src/hyperparams.h

@@ -22,10 +22,8 @@
 #ifndef TUMOR_HYPERPARAMS_H_
 #define TUMOR_HYPERPARAMS_H_
 
-#include "core/real_t.h"
-
-#include <map>
-#include <string>
+#include "biodynamo.h"
+#include <cmath>
 
 namespace bdm {
 

src/tumor_cell.cc

@@ -18,9 +18,13 @@
  * This file contains a model developed under Google Summer of Code (GSoC)
  * for the compiler-research.org organization.
  */
+
 #include "tumor_cell.h"
 #include "hyperparams.h"
 #include "utils_aux.h"
+#include <algorithm>
+#include <stdexcept>
+#include <string>
 
 namespace bdm {
 

src/utils_aux.cc

@@ -18,10 +18,14 @@
  * This file contains a model developed under Google Summer of Code (GSoC)
  * for the compiler-research.org organization.
  */
+
 #include "utils_aux.h"
-#include "core/util/random.h"
 #include "hyperparams.h"
 #include "tumor_cell.h"
+#include <cmath>
+#include <fstream>
+#include <tuple>
+#include <vector>
 
 namespace bdm {
 

src/utils_aux.h

@@ -23,6 +23,9 @@
 #define CORE_UTIL_UTILS_AUX_H_
 
 #include "biodynamo.h"
+#include <cstdint>
+#include <tuple>
+#include <vector>
 
 namespace bdm {
 /// Forward declaration of TumorCell class