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Author: vgvassilev

.clang-tidy

@@ -42,6 +42,8 @@ CheckOptions:
     value:           ''
   - key:             readability-identifier-naming.ClassMemberSuffix
     value:           '_'
+  - key:             readability-identifier-naming.PrivateClassMemberSuffix
+    value:           '_'
   - key:             readability-identifier-naming.ConstantCase
     value:           CamelCase
   - key:             readability-identifier-naming.ConstantPrefix

src/cart_cell.h

@@ -194,9 +194,7 @@ class CartCell : public Cell {
   /// Pointer to the oxygen diffusion grid
   DiffusionGrid* oxygen_dgrid_ = nullptr;
 
-  // NOLINTNEXTLINE(readability-identifier-naming)
   /// Pointer to the immunostimulatory factor diffusion grid
-  // NOLINTNEXTLINE(readability-identifier-naming)
   DiffusionGrid* immunostimulatory_factor_dgrid_ = nullptr;
 
   /// Flag indicating if the cell is attached to a tumor cell

src/tumor_cell.h

@@ -80,7 +80,6 @@ enum class TumorCellType : int {
 /// - Displacement computation applying pushing/adhesive forces between cells
 /// - Oncoprotein expression levels
 /// - Interactions with CAR-T cells
-
 class TumorCell : public Cell {
   // NOLINTNEXTLINE(modernize-type-traits)
   BDM_AGENT_HEADER(TumorCell, Cell, 1);
@@ -94,8 +93,6 @@ class TumorCell : public Cell {
   TumorCell(const TumorCell&) = default;
   TumorCell(TumorCell&&) = default;
   ~TumorCell() override = default;
-
-  // NOLINTNEXTLINE(cppcoreguidelines-special-member-functions)
   // Assignment operators are implicitly deleted due to base class (Cell/Agent)
 
   /// Called when a new agent is created (after cell division)