Parameter files for ChReef cropping

Author: schilling40

reproducibility/block_extraction/ChReef_MLR144R.json

@@ -0,0 +1,47 @@
+[
+	{
+		"cochlea": "M_LR_000144_R",
+		"image_channel": [
+			"PV",
+			"GFP",
+			"SGN_v2"
+		],
+		"crop_centers": [
+			[
+				1329,
+				1080,
+				602
+			],
+			[
+				1220,
+				898,
+				790
+			],
+			[
+				1369,
+				645,
+				732
+			],
+			[
+				1184,
+				629,
+				530
+			],
+			[
+				875,
+				622,
+				610
+			],
+			[
+				721,
+				431,
+				805
+			]
+		],
+		"halo_size": [
+			256,
+			256,
+			100
+		]
+	}
+]

reproducibility/block_extraction/ChReef_MLR145R.json

@@ -0,0 +1,47 @@
+[
+	{
+		"cochlea": "M_LR_000145_R",
+		"image_channel": [
+			"PV",
+			"GFP",
+			"SGN_v2"
+		],
+		"crop_centers": [
+			[
+				789,
+				820,
+				670
+			],
+			[
+				920,
+				1025,
+				908
+			],
+			[
+				801,
+				1278,
+				1090
+			],
+			[
+				620,
+				1449,
+				911
+			],
+			[
+				836,
+				1461,
+				700
+			],
+			[
+				959,
+				1639,
+				922
+			]
+		],
+		"halo_size": [
+			256,
+			256,
+			100
+		]
+	}
+]

reproducibility/block_extraction/ChReef_MLR155R.json

@@ -0,0 +1,47 @@
+[
+	{
+		"cochlea": "M_LR_000155_R",
+		"image_channel": [
+			"PV",
+			"GFP",
+			"SGN_v2"
+		],
+		"crop_centers": [
+			[
+				1634,
+				442,
+				633
+			],
+			[
+				1339,
+				548,
+				790
+			],
+			[
+				1016,
+				575,
+				676
+			],
+			[
+				1037,
+				804,
+				470
+			],
+			[
+				1188,
+				1017,
+				622
+			],
+			[
+				921,
+				1060,
+				752
+			]
+		],
+		"halo_size": [
+			256,
+			256,
+			100
+		]
+	}
+]