Update detection parameters

Author: schilling40

flamingo_tools/segmentation/sgn_detection.py

@@ -35,9 +35,9 @@ def sgn_detection(
         spot_radius: Radius in pixel to convert spot detection of SGNs into a volume.
     """
     if block_shape is None:
-        block_shape = (24, 256, 256)
+        block_shape = (12, 128, 128)
     if halo is None:
-        halo = (12, 64, 64)
+        halo = (10, 64, 64)
 
     # Skip existing prediction, which is saved in output_folder/predictions.zarr
     skip_prediction = False

scripts/sgn_detection/sgn_detection.py

@@ -25,8 +25,8 @@ def main():
 
     args = parser.parse_args()
 
-    block_shape = (24, 256, 256)
-    halo = (12, 64, 64)
+    block_shape = (12, 128, 128)
+    halo = (10, 64, 64)
 
     if args.s3:
         input_path, fs = s3_utils.get_s3_path(args.input, bucket_name=args.s3_bucket_name,