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Intensity annotation for LaVision-OTOF
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4 files changed

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4 files changed

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‎reproducibility/block_extraction/LaVision_OTOF_IHC.json‎ renamed to ‎reproducibility/block_extraction/LaVision_OTOF_IHC_training.json‎

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‎reproducibility/block_extraction/LaVision_rbOtof.json‎

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[
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{
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"cochlea": "LaVision-OTOF23R",
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"image_channel": [
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"CR",
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"rbOtof",
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"IHC_LOWRES-v3"
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],
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"segmentation_channel": "IHC_LOWRES-v3",
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"type": "ihc",
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"resolution": [
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],
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"halo_size": [
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],
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"crop_centers": [
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[
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]
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]
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},
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{
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"cochlea": "LaVision-OTOF25R",
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"image_channel": [
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"CR",
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"rbOtof",
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"IHC_LOWRES-v3"
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],
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"segmentation_channel": "IHC_LOWRES-v3",
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"resolution": [
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"n_blocks": 3,
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"max_edge_distance": 300,
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"component_list": [
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"halo_size": [
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"crop_centers": [
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]
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]
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},
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{
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"cochlea": "LaVision-OTOF36R",
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"image_channel": [
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"CR",
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"rbOtof",
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"IHC_LOWRES-v3"
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],
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"segmentation_channel": "IHC_LOWRES-v3",
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"type": "ihc",
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"resolution": [
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"halo_size": [
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"crop_centers": [
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]
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}
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]

‎reproducibility/object_measures/LaVision-OTOF23R.json‎

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[
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{
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"cochlea": "LaVision-OTOF23R",
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"image_channel": [
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"CR",
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"rbOtof"
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],
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"segmentation_channel": "IHC_LOWRES-v3",
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"component_list": [
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],
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"resolution" : [
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]
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}
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]

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