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The most important parts of the user interface are:
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1. The napari layers that contain the image, segmentations and prompts:
@@ -98,7 +98,7 @@ The application for 3d segmentation can be started as follows:
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- Via the command line with the command `micro_sam.annotator_3d`. Run `micro_sam.annotator_3d -h` for details.
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- From a python script with the function `micro_sam.sam_annotator.annotator_3d`. Check out [examples/sam_annotator_3d](https://github.com/computational-cell-analytics/micro-sam/blob/master/examples/sam_annotator_3d.py) for details.
The most important parts of the user interface are listed below. Most of these elements are the same as for [the 2d segmentation app](https://github.com/computational-cell-analytics/micro-sam#2d-segmentation).
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1. The napari layers that contain the image, segmentation and prompts. Same as for [the 2d segmentation app](https://github.com/computational-cell-analytics/micro-sam#2d-segmentation) but without the `auto_segmentation` layer.
@@ -115,7 +115,7 @@ The application for interactive tracking (of 2d data) can be started as follows:
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- Via the command line with the command `micro_sam.annotator_tracking`. Run `micro_sam.annotator_tracking -h` for details.
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- From a python script with the function `micro_sam.sam_annotator.annotator_tracking`. Check out [examples/sam_annotator_tracking](https://github.com/computational-cell-analytics/micro-sam/blob/master/examples/sam_annotator_tracking.py) for details.
The most important parts of the user interface are listed below. Most of these elements are the same as for [the 2d segmentation app](https://github.com/computational-cell-analytics/micro-sam#2d-segmentation).
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1. The napari layers thaat contain the image, segmentation and prompts. Same as for [the 2d segmentation app](https://github.com/computational-cell-analytics/micro-sam#2d-segmentation) but without the `auto_segmentation` layer, `current_tracks` and `committed_tracks` are the equivalent of `current_object` and `committed_objects`.
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