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Fix typos
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finetuning/generalists/compile_results.py

Lines changed: 3 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -64,6 +64,8 @@ def add_cellpose_results(datasets, out_path):
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results = []
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for dataset in datasets:
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if dataset == "livecell":
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continue
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res_path = os.path.join(cp_root, dataset, "cellpose.csv")
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ds_res = pd.read_csv(res_path)
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ds_res.insert(0, "prompt", ["cellpose"] * ds_res.shape[0])
@@ -87,7 +89,7 @@ def compile_lm():
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# add the deepbacs and tissuenet specialist results
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assert os.path.exists(res_path)
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compile_results(["vit_h_tissuenet", "vit_b_tissuenet"], ["tissuenet"], res_path, True)
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compile_results(["vit_h_deepbacs", "vit_b_deebacs"], ["deepbacs"], res_path, True)
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compile_results(["vit_h_deepbacs", "vit_b_deepbacs"], ["deepbacs"], res_path, True)
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# add the cellpose results
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add_cellpose_results(LM_DATASETS, res_path)

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