diff --git a/tools/beamspy/beamspy.xml b/tools/beamspy/beamspy.xml index af31137..9ef7ce4 100644 --- a/tools/beamspy/beamspy.xml +++ b/tools/beamspy/beamspy.xml @@ -1,7 +1,7 @@ - + - Birmingham mEtabolite Annotation for Mass SpectroMetry - beamspy + beamspy + + + + + + + @@ -225,7 +241,7 @@ - + @@ -301,7 +317,7 @@ - + @@ -408,4 +424,4 @@ Developers and contributors - + \ No newline at end of file diff --git a/tools/beamspy/databases.txt b/tools/beamspy/databases.txt index 03d7787..ee7b99d 100644 --- a/tools/beamspy/databases.txt +++ b/tools/beamspy/databases.txt @@ -1,24 +1,23 @@ description database_name PlantCyc - ChlamyCyc (Chlamydomonas reinhardtii) | 2018-07-02 | v1 biocyc_chlamycyc_20180702_v1 -CHEBI - Full database | rel169 | v1 chebi_full_rel169_v1 -CHEBI - 3stars records | rel169 | v1 chebi_3star_rel169_v1 -HMDB - The Urine Metabolome Database | v4.0 | v1 hmdb_urine_v4_0_v1 -HMDB - The Serum Metabolome Database | v4.0 | v1 hmdb_serum_v4_0_v1 -HMDB - The cerebrospinal fluid (CSF) Metabolome Database | v4.0 | v1 hmdb_csf_v4_0_v1 -HMDB - The Saliva Metabolome Database | v4.0 | v1 hmdb_saliva_v4_0_v1 -HMDB - The Fecal Metabolome Database | v4.0 | v1 hmdb_feces_v4_0_v1 -HMDB - The Sweat Metabolome Database | v4.0 | v1 hmdb_sweat_v4_0_v1 -HMDB - The Human Metabolome Database | v4.0 | v1 hmdb_full_v4_0_v1 -KEGG - Daphnia pulex (dpx) | 2018-11-01 | v1 kegg_dpx_20181101_v1 -KEGG - Human (hsa) | 2018-11-01 | v1 kegg_hsa_20181101_v1 -KEGG - Full database | 2018-11-01 | v1 kegg_full_20181101_v1 -LIPID_MAPS - FattyAcyls | 2018-12-17 | v1 lipidmaps_fattyacyls_20181217_v1 -LIPID_MAPS - Glycerolipids | 2018-12-17 | v1 lipidmaps_glycerolipids_20181217_v1 -LIPID_MAPS - Glycerophospholipids | 2018-12-17 | v1 lipidmaps_slycerophospholipids_20181217_v1 -LIPID_MAPS - Polyketides | 2018-12-17 | v1 lipidmaps_solyketides_20181217_v1 -LIPID_MAPS - PrenolLipids | 2018-12-17 | v1 lipidmaps_srenollipids_20181217_v1 -LIPID_MAPS - Sacccharolipids | 2018-12-17 | v1 lipidmaps_sacccharolipids_20181217_v1 -LIPID_MAPS - Sphingolipids | 2018-12-17 | v1 lipidmaps_sphingolipids_20181217_v1 -LIPID_MAPS - SterolLipids | 2018-12-17 | v1 lipidmaps_sterollipids_20181217_v1 -LIPID_MAPS - Full database | 2018-12-17 | v1 lipidmaps_full_20181217_v1 -Yeast Metabolome Database (YMDB) | v2.0 | v1 ymdb_full_v2_0_v1 +CHEBI - Complete database | rel195 | v1 chebi_complete_rel195_v1 +CHEBI - Complete 3star records | rel195 | v1 chebi_complete_3star_rel195_v1 +HMDB - The Urine Metabolome Database | v4.0 2020-09-10 | v1 hmdb_urine_v4_0_20200910_v1 +HMDB - The Serum Metabolome Database | v4.0 2020-09-10 | v1 hmdb_serum_v4_0_20200910_v1 +HMDB - The cerebrospinal fluid (CSF) Metabolome Database | v4.0 2020-09-10 | v1 hmdb_csf_v4_0_20200910_v1 +HMDB - The Saliva Metabolome Database | v4.0 2020-09-10 | v1 hmdb_saliva_v4_0_20200910_v1 +HMDB - The Fecal Metabolome Database | v4.0 2020-09-10 | v1 hmdb_feces_v4_0_20200910_v1 +HMDB - The Sweat Metabolome Database | v4.0 2020-09-10 | v1 hmdb_sweat_v4_0_20200910_v1 +HMDB - The Human Metabolome Database | v4.0 2020-09-09 | v1 hmdb_full_v4_0_20200909_v1 +KEGG - Daphnia pulex (dpx) | 2021-01-11 | v1 kegg_dpx_20210111_v1 +KEGG - Human (hsa) | 2021-01-11 | v1 kegg_hsa_20210111_v1 +KEGG - Full database | 2021-01-11 | v1 kegg_full_20210111_v1 +LIPID_MAPS - Fatty Acyls [FA] | 2020-10-01 | v1 lipidmaps_fattyacyls_20201001_v1 +LIPID_MAPS - Glycerolipids [GL] | 2020-10-01 | v1 lipidmaps_glycerolipids_20201001_v1 +LIPID_MAPS - Glycerophospholipids [GP] | 2020-10-01 | v1 lipidmaps_slycerophospholipids_20201001_v1 +LIPID_MAPS - Polyketides [PK] | 2020-10-01 | v1 lipidmaps_solyketides_20201001_v1 +LIPID_MAPS - Prenol Lipids [PR] | 2020-10-01 | v1 lipidmaps_srenollipids_20201001_v1 +LIPID_MAPS - Sacccharolipids [SL]| 2020-10-01 | v1 lipidmaps_sacccharolipids_20201001_v1 +LIPID_MAPS - Sphingolipids [SP] | 2020-10-01 | v1 lipidmaps_sphingolipids_20201001_v1 +LIPID_MAPS - Sterol Lipids [ST] | 2020-10-01 | v1 lipidmaps_sterollipids_20201001_v1 +LIPID_MAPS - Full database | 2020-10-01 | v1 lipidmaps_full_20201001_v1 \ No newline at end of file