bioconductor-structtoolbox-v0.8.5-r3.6 (#6)

Author: RJMW

recipes/bioconductor-structtoolbox/meta.yaml

@@ -1,14 +1,13 @@
-{% set version = "1.3.1" %}
+{% set version = "0.8.5" %}
 {% set name="structToolbox" %}
-{% set bioc = "3.13" %}
 
 package:
   name: 'bioconductor-{{ name|lower }}'
   version: '{{ version }}'
 source:
   url:
-    - 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
-  md5: 1746266dc3aea209d1160259d2af22c2  
+    - 'https://github.com/computational-metabolomics/{{ name|lower }}/archive/v{{ version|lower }}.tar.gz'
+  md5: 7cb8483e38c8f278ee2e0e77e597061e 
 build:
   number: 0
   rpaths:
@@ -17,65 +16,67 @@ build:
   noarch: generic
 requirements:
   host:
-    - pandoc
-    - icu
-    - 'r-base >4.0,<4.1'
-    - r-ggplot2
-    - r-gridExtra
-    - r-missforest
-    - r-ggthemes
-    - r-pls
-    - r-sp
-    - r-scales
-    - r-car
+    - icu ==64.2
+    - tbb <=2020.2
+    - r-base ==3.6.1
+    - r-ggplot2 ==3.2.1
+    - r-gridextra =2.3
+    - r-missforest ==1.4
+    - r-ggthemes ==4.2.0
+    - r-pls ==2.7_1
+    - r-sp ==1.3_1
+    - r-scales ==1.1.0
+    - r-car ==3.0_3
     - r-reshape2
-    - r-agricolae
+    - r-agricolae ==1.3_1
     - r-openxlsx
-    - r-knitr
-    - r-rmarkdown
-    - r-captioner
-    - r-emmeans
-    - r-lmertest
+    - r-knitr ==1.26
+    - r-rmarkdown ==1.17
+    - r-captioner ==2.2.3
+    - r-emmeans ==1.4.2
+    - r-lmertest ==3.1_0
     - r-lme4
     - r-nlme
     - r-mvtnorm
     - r-ggdendro
     - r-rtsne
-    - r-stringi
-    - bioconductor-impute
-    - bioconductor-pcaMethods
-    - bioconductor-struct
-    - bioconductor-pmp
+    - r-stringi ==1.4.3
+    - bioconductor-impute ==1.60.0
+    - bioconductor-pcaMethods ==1.78.0
+    - bioconductor-sbcms >=0.99.1
+    - bioconductor-struct ==0.4.1
+    - bioconductor-pmp ==0.2.4
   run:
-    - pandoc
-    - icu
-    - 'r-base >4.0,<4.1'
-    - r-ggplot2
-    - r-gridExtra
-    - r-missforest
-    - r-ggthemes
-    - r-pls
-    - r-sp
-    - r-scales
-    - r-car
+    - icu ==64.2
+    - tbb <=2020.2
+    - r-base ==3.6.1
+    - r-ggplot2 ==3.2.1
+    - r-gridextra =2.3
+    - r-missforest ==1.4
+    - r-ggthemes ==4.2.0
+    - r-pls ==2.7_1
+    - r-sp ==1.3_1
+    - r-scales ==1.1.0
+    - r-car ==3.0_3
     - r-reshape2
-    - r-agricolae
+    - r-agricolae ==1.3_1
     - r-openxlsx
-    - r-knitr
-    - r-rmarkdown
-    - r-captioner
-    - r-emmeans
-    - r-lmertest
+    - r-knitr ==1.26
+    - r-rmarkdown ==1.17
+    - r-captioner ==2.2.3
+    - r-emmeans ==1.4.2
+    - r-lmertest ==3.1_0
     - r-lme4
     - r-nlme
     - r-mvtnorm
     - r-ggdendro
     - r-rtsne
-    - r-stringi
-    - bioconductor-impute
-    - bioconductor-pcaMethods
-    - bioconductor-struct
-    - bioconductor-pmp
+    - r-stringi ==1.4.3
+    - bioconductor-impute ==1.60.0
+    - bioconductor-pcaMethods ==1.78.0
+    - bioconductor-sbcms >=0.99.1
+    - bioconductor-struct ==0.4.1
+    - bioconductor-pmp ==0.2.4
   build:
     - {{ compiler('c') }}
     - {{ compiler('cxx') }}
@@ -84,7 +85,7 @@ test:
   commands:
     - '$R -e "library(''{{ name }}'')"'
 about:
-  home: 'http://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
+  home: 'https://github.com/computational-metabolomics/structToolbox'
   license: 'GPL (>= 2)'
   summary: 'Extends the class templates provided by the struct package to provide methods for training PCA, PLS models with cross-validation, permutation testing etc.'