fixes for topeft test

Author: btovar

install-topeft.sh

@@ -5,10 +5,11 @@
 # Installing fresh from conda is too slow, use micromamba instead.
 curl -L micro.mamba.pm/install.sh >install-micromamba.sh
 chmod 755 install-micromamba.sh
-bash ./install-micromamba.sh
 
-# Activate the shell hooks without starting a new shell.
 export MAMBA_ROOT_PREFIX=$HOME/micromamba
+bash ./install-micromamba.sh < /dev/null
+
+# Activate the shell hooks without starting a new shell.
 eval "$($HOME/.local/bin/micromamba shell hook --shell bash)"
 
 # Activate the root environment

test-topeft.sh

@@ -1,8 +1,9 @@
 #!/bin/bash
 
-. install-topeft.sh
+. ./install-topeft.sh
 
 cd topeft/analysis/topeft_run2
+mkdir -p /tmp/${USER}
 
 echo "*** Starting a single WQ worker"
 work_queue_worker -d all -o worker.log --single-shot -t 300 localhost 9123 &