add test save stim tsv

Author: Remi-Gau

tests/test_createDataDictionary.m

@@ -61,7 +61,7 @@ function test_createDataDictionaryBasic()
     % data to test against
     expectedStruct = bids.util.jsondecode( ...
                                           fullfile( ...
-                                                   pwd, '..', 'tests', ...
+                                                   pwd, ...
                                                    'testData', ...
                                                    'eventsDataDictionary.json'));
 
@@ -128,8 +128,6 @@ function test_createDataDictionaryStim()
     expectedStruct = bids.util.jsondecode( ...
                                           fullfile( ...
                                                    pwd, ...
-                                                   '..', ...
-                                                   'tests', ...
                                                    'testData', ...
                                                    'stimDataDictionary.json'));
 

tests/test_createJson.m

@@ -169,14 +169,14 @@ function test_createJsonExtra()
                                                  fileName));
 
     % data to test against
-%     JsonContent = [
-%         '{"Instructions": "","RepetitionTime": [],"SliceTiming": [],', ...
-%         '"TaskDescription": "","TaskName": "testtask",',  ...
-%         '"extraInfo": {"nestedExtraInfo": "something extra"}', ...
-%         '}'];
-%     system(sprintf("echo %s%s%s > extra_bold.json", "'", JsonContent, "'"));
-    
-    
+    %     JsonContent = [
+    %         '{"Instructions": "","RepetitionTime": [],"SliceTiming": [],', ...
+    %         '"TaskDescription": "","TaskName": "testtask",',  ...
+    %         '"extraInfo": {"nestedExtraInfo": "something extra"}', ...
+    %         '}'];
+    %     system(sprintf("echo %s%s%s > extra_bold.json", "'", JsonContent, "'"));
+
+    ls
     expectedStruct = bids.util.jsondecode(fullfile(pwd, 'extra_bold.json'));
 
     % test

tests/test_saveEventsFileSave.m

@@ -46,6 +46,63 @@ function test_saveEventsFileSaveBasic()
 
 end
 
+function test_saveEventsFileSaveStim()
+
+    %% set up
+
+    cfg.verbose = 2;
+
+    cfg.subject.subjectNb = 1;
+    cfg.subject.runNb = 1;
+
+    cfg.task.name = 'testtask';
+
+    cfg.testingDevice = 'mri';
+
+    cfg = createFilename(cfg);
+
+    logFile.extraColumns = {'Speed', 'LHL24', 'is_Fixation'};
+
+    logFile = saveEventsFile('init_stim', cfg, logFile);
+
+    logFile.extraColumns.Speed.length = 1;
+    logFile.extraColumns.LHL24.length = 3;
+    logFile.extraColumns.is_Fixation.length = 1;
+
+    % create the events file and header
+    logFile = saveEventsFile('open', cfg, logFile);
+
+    % ROW 2: normal events : all info is there
+    logFile(1, 1).onset = 2;
+    logFile(end, 1).trial_type = 'motion_up';
+    logFile(end, 1).duration = 3;
+    logFile(end, 1).Speed = 2;
+    logFile(end, 1).LHL24 = 1:3;
+    logFile(end, 1).is_Fixation = true;
+
+    logFile = saveEventsFile('save', cfg, logFile);
+
+    % close the file
+    saveEventsFile('close', cfg, logFile);
+
+    % check the extra columns of the header and some of the content
+    nbExtraCol = ...
+        logFile(1).extraColumns.Speed.length + ...
+        logFile(1).extraColumns.LHL24.length + ...
+        logFile(1).extraColumns.is_Fixation.length;
+
+    funcDir = fullfile(cfg.dir.outputSubject, cfg.fileName.modality);
+
+    FID = fopen(fullfile(funcDir, logFile.filename), 'r');
+    content = textscan(FID, repmat('%s', 1, nbExtraCol), 'Delimiter', '\t', 'EndOfLine', '\n');
+
+    % event 1/ ROW 2: check that values are entered correctly
+    assertEqual(content{1}{1}, sprintf('%f', 2));
+    assertEqual(content{4}{1}, sprintf('%f', 3));
+    assertEqual(content{5}{1}, 'true');
+
+end
+
 function test_saveEventsFileSaveSkipEmptyEvents()
 
     %% set up