Merge remote-tracking branch 'upstream/master' into dev

Author: Remi-Gau

.github/dependabot.yml

@@ -2,7 +2,12 @@
 # https://docs.github.com/en/code-security/dependabot/dependabot-version-updates/configuration-options-for-the-dependabot.yml-file
 version: 2
 updates:
-  - package-ecosystem: "github-actions"
-    directory: "/"
+  - package-ecosystem: 'github-actions'
+    directory: '/'
     schedule:
-      interval: "weekly"
+      interval: 'monthly'
+
+  - package-ecosystem: 'gitsubmodule'
+    directory: '/'
+    schedule:
+      interval: 'monthly'

.github/workflows/bids_validator.yml

@@ -11,7 +11,7 @@ env:
 
 jobs:
   build:
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-22.04
     steps:
 
     - uses: actions/setup-node@v3
@@ -21,7 +21,7 @@ jobs:
     - uses: actions/checkout@v3
       with:
         submodules: true
-        fetch-depth: 1
+        fetch-depth: 0
 
     - name: Make jsonread for octave
       run: |

.github/workflows/check_md_links.yml

@@ -14,5 +14,5 @@ jobs:
   markdown-link-check:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@master
+    - uses: actions/checkout@v3
     - uses: gaurav-nelson/github-action-markdown-link-check@v1

.github/workflows/miss_hit.yml

@@ -14,13 +14,13 @@ jobs:
 
     steps:
 
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
       with:
         submodules: true
         fetch-depth: 1
 
     - name: Set up Python 3.6
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v4
       with:
         python-version: 3.6
 

.github/workflows/run_tests.yml

@@ -13,7 +13,7 @@ jobs:
     runs-on: ubuntu-20.04
     steps:
 
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
       with:
         submodules: true
         fetch-depth: 1
@@ -37,7 +37,7 @@ jobs:
         cover_xml_file: coverage.xml
 
     - name: Code coverage
-      uses: codecov/codecov-action@v1
+      uses: codecov/codecov-action@v3
       with:
        token: ${{ secrets.CODECOV_TOKEN }} # not required for public repos
        file:  coverage.xml # optional

.github/workflows/update_submodules.yml

@@ -94,7 +94,7 @@ jobs:
       # a PR is created using the checkout branch for this workflow
       # https://github.com/peter-evans/create-pull-request
       - name: Create Pull-Request
-        uses: peter-evans/create-pull-request@v3
+        uses: peter-evans/create-pull-request@v4
         with:
           commit-message: Update submodules
           delete-branch: true