update from retinotopy

Author: Remi-Gau

checkPtbVersion.m

@@ -1,7 +1,7 @@
 function checkPtbVersion()
     % Checks that the right dependencies are installed.
 
-    printCredits();
+    printCreditsCppPtb();
 
     PTB.major =  3;
     PTB.minor = 0;

collectAndSaveResponses.m

@@ -0,0 +1,17 @@
+function responseEvents = collectAndSaveResponses(cfg, expParameters, logFile, experimentStart)
+    
+    responseEvents = getResponse('check', cfg.keyboard.responseBox, cfg);
+    
+    if isfield(responseEvents(1), 'onset') && ~isempty(responseEvents(1).onset)
+        
+        for iResp = 1:size(responseEvents, 1)
+            responseEvents(iResp).onset = ...
+                responseEvents(iResp).onset - experimentStart;
+        end
+        
+        responseEvents.fileID = logFile.fileID;
+        responseEvents.extraColumns = logFile.extraColumns;
+        saveEventsFile('save', expParameters, responseEvents);
+        
+    end
+end

eyeTracker.m

@@ -1,22 +1,22 @@
 function [el, edfFile] = eyeTracker(input, cfg, expParameters, varargin)
-
+    
     if ~cfg.eyeTracker
-
+        
         el = [];
-
+        
     else
-
+        
         switch input
-
+            
             case 'Calibration'
-
+                
                 %% STEP 2
                 % Provide Eyelink with details about the graphics environment
                 %  and perform some initializations. The information is returned
                 %  in a structure that also contains useful defaults
                 %  and control codes (e.g. tracker state bit and Eyelink key values).
                 el = EyelinkInitDefaults(cfg.win);
-
+                
                 % calibration has silver background with black targets, sound and smaller
                 %  targets
                 el.backgroundcolour        = [192 192 192, (cfg.win)];
@@ -25,15 +25,15 @@
                 el.calibrationtargetsize   = 1;
                 el.calibrationtargetwidth  = 0.5;
                 el.displayCalResults       = 1;
-
+                
                 % call this function for changes to the calibration structure to take
                 %  affect
                 EyelinkUpdateDefaults(el);
-
-                % STEP 3
+                
+                %% STEP 3
                 % Initialization of the connection with the Eyelink Gazetracker.
                 %  exit program if this fails.
-
+                
                 % make sure EL is initialized.
                 ELinit  = Eyelink('Initialize');
                 if ELinit ~= 0
@@ -42,7 +42,7 @@
                     Screen('CloseAll');
                     return
                 end
-
+                
                 % make sure we're still connected.
                 ELconnection = Eyelink('IsConnected');
                 if ELconnection ~= 1
@@ -51,45 +51,45 @@
                     Screen('CloseAll');
                     return
                 end
-
+                
                 %
                 if ~EyelinkInit(0, 1)
                     fprintf('Eyelink Init aborted.\n');
                     return
                 end
-
+                
                 % Open the edf file to write the data
                 edfFile = 'demo.edf';
                 Eyelink('Openfile', edfFile);
-
+                
                 [el.v, el.vs] = Eyelink('GetTrackerVersion');
                 fprintf('Running experiment on a ''%s'' tracker.\n', el.vs);
-
+                
                 % make sure that we get gaze data from the Eyelink
                 Eyelink('Command', 'link_sample_data = LEFT,RIGHT,GAZE,AREA');
-
+                
                 % STEP 4
                 % SET UP TRACKER CONFIGURATION
                 % Setting the proper recording resolution, proper calibration type,
                 %   as well as the data file content;
-                %            Eyelink('command', 'add_file_preamble_text ''Recorded by 
+                %            Eyelink('command', 'add_file_preamble_text ''Recorded by
                 %EyelinkToolbox demo-experiment''');
-
+                
                 % This command is crucial to map the gaze positions from the tracker to
                 %  screen pixel positions to determine fixation
                 Eyelink('command', 'screen_pixel_coords = %ld %ld %ld %ld', 0, 0, 0, 0);
                 Eyelink('message', 'DISPLAY_COORDS %ld %ld %ld %ld', 0, 0, 0, 0);
-
+                
                 % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % %
                 % DEFAULT CALIBRATION
                 % set calibration type.
                 Eyelink('command', 'calibration_type = HV5');
-
+                
                 % you must send this command with value NO for custom calibration
                 %   you must also reset it to YES for subsequent experiments
                 Eyelink('command', 'generate_default_targets = YES');
                 % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % %
-
+                
                 %         % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % %
                 %         % CUSTOM CALIBRATION
                 %         % (SET MANUALLY THE DOTS COORDINATES, HERE FOR 6 DOTS)
@@ -120,17 +120,17 @@
                 %             128,341, ... %width*0.1,height*1/3
                 %             1152,341 );  %width-width*0.1,height*1/3
                 %         % % % % % % % % % % % % % % % % % % % % % % % % % % % % %
-
+                
                 %             % set parser (conservative saccade thresholds)
                 %             Eyelink('command', 'saccade_velocity_threshold = 35');
                 %             Eyelink('command', 'saccade_acceleration_threshold = 9500');
-
+                
                 % set EDF file contents (not clear what this lines are used for)
                 el.vsn = regexp(el.vs, '\d', 'match'); % wont work on EL
-
+                
                 % enter Eyetracker camera setup mode, calibration and validation
                 EyelinkDoTrackerSetup(el);
-
+                
                 %             %         % do a final check of calibration using driftcorrection
                 %             %         % You have to hit esc before return.
                 %             %         EyelinkDoDriftCorrection(el);
@@ -142,13 +142,13 @@
                 %             %             Screen('CloseAll');
                 %             %             return;
                 %             %         end
-
+                
                 % Go back to black screen
                 Screen('FillRect', cfg.win, [0 0 0]);
                 Screen('Flip', cfg.win);
-
+                
             case 'StartRecording'
-
+                
                 % STEP 5
                 % EyeLink Start recording the block
                 Eyelink('Command', 'set_idle_mode');
@@ -157,7 +157,7 @@
                 %         % here to tag the recording, in the past caused delays during the
                 %         %  presentation so I avoided to use it
                 %         Eyelink('message',['TRIALID ',num2str(blocks),'_startTrial']);
-
+                
                 % check recording status, stop display if error
                 checkrec = Eyelink('checkrecording');
                 if checkrec ~= 0
@@ -166,17 +166,17 @@
                     Screen('CloseAll');
                     return
                 end
-
+                
                 % record a few samples before we actually start displaying
                 %  otherwise you may lose a few msec of data
                 WaitSecs(0.1);
-
-                % HERE START THE STIMALTION OF THE BLOCK
+                
+                % HERE START THE STIMULATION OF THE BLOCK
                 % to mark the beginning of the trial
                 Eyelink('Message', 'SYNCTIME');
-
+                
             case 'StopRecordings'
-
+                
                 % STEP 8
                 % finish up: stop recording eye-movements,
                 % EyeLink Stop recording the block
@@ -185,20 +185,20 @@
                 WaitSecs(0.1);
                 % close graphics window, close data file and shut down tracker
                 Eyelink('StopRecording');
-
+                
             case 'Shutdown'
-
+                
                 edfFileName = expParameters.fileName.eyetracker;
                 edfFile = 'demo.edf';
-
+                
                 % STEP 6
                 % At the end of the experiment, save the edf file and shut down connection
                 %  with Eyelink
-
+                
                 Eyelink('Command', 'set_idle_mode');
                 WaitSecs(0.5);
                 Eyelink('CloseFile');
-
+                
                 % download data file
                 try
                     fprintf('Receiving data file ''%s''\n', edfFileName);
@@ -215,10 +215,76 @@
                 catch
                     fprintf('Problem receiving data file ''%s''\n', edfFileName);
                 end
-
+                
                 Eyelink('shutdown');
-                Screen('CloseAll');
-
+                
         end
-
+        
+    end
+    
+end
+
+%% subfunctions for iView
+
+function ivx = eyeTrackInit(expParameters)
+    % initialize iView eye tracker
+    
+    ivx = [];
+    
+    if cfg.eyeTracker
+        
+        host = expParameters.Eyetracker.Host;
+        port = expParameters.Eyetracker.Port;
+        window = expParameters.Eyetracker.Window;
+        
+        % original: ivx=iviewxinitdefaults(window, 9 , host, port);
+        ivx = iviewxinitdefaults2(window, 9, [], host, port);
+        ivx.backgroundColour = 0;
+        [~, ivx] = iViewX('openconnection', ivx);
+        [success, ivx] = iViewX('checkconnection', ivx);
+        if success ~= 1
+            error('connection to eye tracker failed');
+        end
+    end
+end
+
+function eyeTrackStart(ivx, expParameters)
+    % start iView eye tracker
+    if cfg.eyeTracker
+        % to clear data buffer
+        iViewX('clearbuffer', ivx);
+        % start recording
+        iViewX('startrecording', ivx);
+        iViewX('message', ivx, ...
+            [ ...
+            'Start_Ret_', ...
+            'Subj_', expParameters.Subj, '_', ...
+            'Run', num2str(expParameters.Session(end)),  '_', ...
+            expParameters.Apperture, '_', ...
+            expParameters.Direction]);
+        iViewX('incrementsetnumber', ivx, 0);
+    end
+end
+
+function eyeTrackStop(ivx, expParameters)
+    % stop iView eye tracker
+    
+    if cfg.eyeTracker
+        
+        % stop tracker
+        iViewX('stoprecording', ivx);
+        
+        % save data file
+        thedatestr = datestr(now, 'yyyy-mm-dd_HH.MM');
+        strFile = fullfile(OutputDir, ...
+            [expParameters.Subj, ...
+            '_run', num2str(expParameters.Session(end)), '_', ...
+            expParameters.Apperture, '_', ...
+            expParameters.Direction, '_', ...
+            thedatestr, '.idf"']);
+        iViewX('datafile', ivx, strFile);
+        
+        % close iView connection
+        iViewX('closeconnection', ivx);
     end
+end