refactor renameFile

Author: Remi-Gau

demos/roi/neurosynth_left_right_rois.m

@@ -16,11 +16,13 @@
 rightRoiImage = keepHemisphere(roiImage, 'R');
 
 % change the label entity and remove the hs one
-leftRoiImage = renameFile(leftRoiImage, ...
-                          struct('entities', struct( ...
-                                                    'label', 'ns left motion', ...
-                                                    'hemi', '')));
-rightRoiImage = renameFile(rightRoiImage, ...
-                           struct('entities', struct( ...
-                                                     'label', 'ns right motion', ...
-                                                     'hemi', '')));
+specification = struct('entities', struct('label', 'ns left motion', ...
+                                          'hemi', ''));
+bf = bids.File(leftRoiImage);
+bf = bf.rename('spec', specification, 'dry_run', false, 'verbose', true);
+leftRoiImage =  fullfile(bf.path, bf.filename);
+
+specification.entities.label = 'ns right motion';
+bf = bids.File(rightRoiImage);
+bf = bf.rename('spec', specification, 'dry_run', false, 'verbose', true);
+rightRoiImage =  fullfile(bf.path, bf.filename);

docs/source/function_description.rst

@@ -14,10 +14,3 @@ Atlas
 .. automodule:: src.atlas
 
 .. autofunction:: returnAtlasDir
-
-Utilities
-=========
-
-.. automodule:: src.utils
-
-.. autofunction:: renameFile

src/utils/renameFile.m

@@ -8,7 +8,7 @@
   initTestSuite;
 end
 
-function test_renameFile()
+function test_keepHemisphere_basic()
 
   inputDir = fullfile(fileparts(mfilename('fullpath')), '..', 'demos', 'roi');