Merge branch 'master' into marco_add-triggerPaced-IBI

Author: marcobarilari

.all-contributorsrc

@@ -59,13 +59,23 @@
         "bug",
         "userTesting"
       ]
+    },
+    {
+      "login": "iqrashahzad14",
+      "name": "iqrashahzad14",
+      "avatar_url": "https://avatars.githubusercontent.com/u/75671348?v=4",
+      "profile": "https://github.com/iqrashahzad14",
+      "contributions": [
+        "code",
+        "ideas"
+      ]
     }
   ],
   "contributorsPerLine": 7,
   "projectName": "localizer_visual_motion",
   "projectOwner": "cpp-lln-lab",
   "repoType": "github",
   "repoHost": "https://github.com",
-  "skipCi": false
-  "contributorsSortAlphabetically": true
+  "skipCi": false,
+  "contributorsSortAlphabetically": false
 }

.github/workflows/miss_hit_quality.yml

@@ -0,0 +1,38 @@
+name: miss_hit_quality
+
+on:
+  push:
+    branches:
+      - master
+  pull_request:
+    branches: '*'
+
+jobs:
+  build:
+
+    runs-on: ubuntu-latest
+
+    steps:
+
+    - uses: actions/checkout@v2
+      with:
+        submodules: true
+        fetch-depth: 1
+
+    - name: Set up Python 3.6
+      uses: actions/setup-python@v2
+      with:
+        python-version: 3.6
+
+    - name: Install dependencies
+      run: |
+        python -m pip install --upgrade pip setuptools
+        pip3 install -r requirements.txt
+
+    - name: MISS_HIT Metrics
+      run: |
+        mh_metric --ci
+
+    - name: MISS_HIT Bug finder
+      run: |
+        mh_lint

.github/workflows/miss_hit_style.yml

@@ -0,0 +1,34 @@
+name: miss_hit_style
+
+on:
+  push:
+    branches:
+      - master
+  pull_request:
+    branches: '*'
+
+jobs:
+  build:
+
+    runs-on: ubuntu-latest
+
+    steps:
+
+    - uses: actions/checkout@v2
+      with:
+        submodules: true
+        fetch-depth: 1
+
+    - name: Set up Python 3.6
+      uses: actions/setup-python@v2
+      with:
+        python-version: 3.6
+
+    - name: Install dependencies
+      run: |
+        python -m pip install --upgrade pip setuptools
+        pip3 install -r requirements.txt
+
+    - name: MISS_HIT Code style
+      run: |
+        mh_style

.pre-commit-config.yaml

@@ -0,0 +1,36 @@
+repos:
+
+-   repo: local
+
+    hooks:
+
+    - id: mh_style
+      name: mh_style
+      entry: mh_style
+      args: [--process-slx, --fix]
+      files: ^(.*\.(m|slx))$
+      language: python
+      additional_dependencies: [miss_hit_core]
+
+    - id: mh_metric
+      name: mh_metric
+      entry: mh_metric
+      args: [--ci]
+      files: ^(.*\.(m|slx))$
+      language: python
+      additional_dependencies: [miss_hit_core]
+
+    - id: mh_lint
+      name: mh_lint
+      entry: mh_lint
+      files: ^(.*\.(m|slx))$
+      language: python
+      additional_dependencies: [miss_hit]
+
+- repo: https://github.com/pre-commit/pre-commit-hooks
+  rev: v2.0.0
+  hooks:
+    - id: trailing-whitespace
+    - id: end-of-file-fixer
+    - id: check-yaml
+    - id: check-added-large-files

.travis.yml

@@ -1,6 +1,6 @@
 [![](https://img.shields.io/badge/Octave-CI-blue?logo=Octave&logoColor=white)](https://github.com/cpp-lln-lab/localizer_visual_motion/actions)
 <!-- ALL-CONTRIBUTORS-BADGE:START - Do not remove or modify this section -->
-[![All Contributors](https://img.shields.io/badge/all_contributors-4-orange.svg?style=flat-square)](#contributors-)
+[![All Contributors](https://img.shields.io/badge/all_contributors-5-orange.svg?style=flat-square)](#contributors-)
 <!-- ALL-CONTRIBUTORS-BADGE:END -->
 ![](https://github.com/cpp-lln-lab/localizer_visual_motion/workflows/CI/badge.svg)
 
@@ -156,15 +156,17 @@ Thanks goes to these wonderful people ([emoji key](https://allcontributors.org/d
 <!-- markdownlint-disable -->
 <table>
   <tr>
-    <td align="center"><a href="https://github.com/mohmdrezk"><img src="https://avatars2.githubusercontent.com/u/9597815?v=4" width="100px;" alt=""/><br /><sub><b>Mohamed Rezk</b></sub></a><br /><a href="https://github.com/cpp-lln-lab/localizer_visual_motion/commits?author=mohmdrezk" title="Code">💻</a> <a href="#design-mohmdrezk" title="Design">🎨</a> <a href="#ideas-mohmdrezk" title="Ideas, Planning, & Feedback">🤔</a></td>
-    <td align="center"><a href="https://github.com/marcobarilari"><img src="https://avatars3.githubusercontent.com/u/38101692?v=4" width="100px;" alt=""/><br /><sub><b>marcobarilari</b></sub></a><br /><a href="https://github.com/cpp-lln-lab/localizer_visual_motion/commits?author=marcobarilari" title="Code">💻</a> <a href="#design-marcobarilari" title="Design">🎨</a> <a href="#ideas-marcobarilari" title="Ideas, Planning, & Feedback">🤔</a> <a href="https://github.com/cpp-lln-lab/localizer_visual_motion/issues?q=author%3Amarcobarilari" title="Bug reports">🐛</a> <a href="#userTesting-marcobarilari" title="User Testing">📓</a> <a href="https://github.com/cpp-lln-lab/localizer_visual_motion/pulls?q=is%3Apr+reviewed-by%3Amarcobarilari" title="Reviewed Pull Requests">👀</a> <a href="#question-marcobarilari" title="Answering Questions">💬</a> <a href="#infra-marcobarilari" title="Infrastructure (Hosting, Build-Tools, etc)">🚇</a> <a href="#maintenance-marcobarilari" title="Maintenance">🚧</a></td>
-    <td align="center"><a href="https://remi-gau.github.io/"><img src="https://avatars3.githubusercontent.com/u/6961185?v=4" width="100px;" alt=""/><br /><sub><b>Remi Gau</b></sub></a><br /><a href="https://github.com/cpp-lln-lab/localizer_visual_motion/commits?author=Remi-Gau" title="Code">💻</a> <a href="#design-Remi-Gau" title="Design">🎨</a> <a href="#ideas-Remi-Gau" title="Ideas, Planning, & Feedback">🤔</a> <a href="https://github.com/cpp-lln-lab/localizer_visual_motion/issues?q=author%3ARemi-Gau" title="Bug reports">🐛</a> <a href="#userTesting-Remi-Gau" title="User Testing">📓</a> <a href="https://github.com/cpp-lln-lab/localizer_visual_motion/pulls?q=is%3Apr+reviewed-by%3ARemi-Gau" title="Reviewed Pull Requests">👀</a> <a href="#question-Remi-Gau" title="Answering Questions">💬</a> <a href="#infra-Remi-Gau" title="Infrastructure (Hosting, Build-Tools, etc)">🚇</a> <a href="#maintenance-Remi-Gau" title="Maintenance">🚧</a></td>
-    <td align="center"><a href="https://github.com/CerenB"><img src="https://avatars1.githubusercontent.com/u/10451654?v=4" width="100px;" alt=""/><br /><sub><b>CerenB</b></sub></a><br /><a href="https://github.com/cpp-lln-lab/localizer_visual_motion/issues?q=author%3ACerenB" title="Bug reports">🐛</a> <a href="#userTesting-CerenB" title="User Testing">📓</a></td>
+    <td align="center"><a href="https://github.com/mohmdrezk"><img src="https://avatars2.githubusercontent.com/u/9597815?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Mohamed Rezk</b></sub></a><br /><a href="https://github.com/cpp-lln-lab/localizer_visual_motion/commits?author=mohmdrezk" title="Code">💻</a> <a href="#design-mohmdrezk" title="Design">🎨</a> <a href="#ideas-mohmdrezk" title="Ideas, Planning, & Feedback">🤔</a></td>
+    <td align="center"><a href="https://github.com/marcobarilari"><img src="https://avatars3.githubusercontent.com/u/38101692?v=4?s=100" width="100px;" alt=""/><br /><sub><b>marcobarilari</b></sub></a><br /><a href="https://github.com/cpp-lln-lab/localizer_visual_motion/commits?author=marcobarilari" title="Code">💻</a> <a href="#design-marcobarilari" title="Design">🎨</a> <a href="#ideas-marcobarilari" title="Ideas, Planning, & Feedback">🤔</a> <a href="https://github.com/cpp-lln-lab/localizer_visual_motion/issues?q=author%3Amarcobarilari" title="Bug reports">🐛</a> <a href="#userTesting-marcobarilari" title="User Testing">📓</a> <a href="https://github.com/cpp-lln-lab/localizer_visual_motion/pulls?q=is%3Apr+reviewed-by%3Amarcobarilari" title="Reviewed Pull Requests">👀</a> <a href="#question-marcobarilari" title="Answering Questions">💬</a> <a href="#infra-marcobarilari" title="Infrastructure (Hosting, Build-Tools, etc)">🚇</a> <a href="#maintenance-marcobarilari" title="Maintenance">🚧</a></td>
+    <td align="center"><a href="https://remi-gau.github.io/"><img src="https://avatars3.githubusercontent.com/u/6961185?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Remi Gau</b></sub></a><br /><a href="https://github.com/cpp-lln-lab/localizer_visual_motion/commits?author=Remi-Gau" title="Code">💻</a> <a href="#design-Remi-Gau" title="Design">🎨</a> <a href="#ideas-Remi-Gau" title="Ideas, Planning, & Feedback">🤔</a> <a href="https://github.com/cpp-lln-lab/localizer_visual_motion/issues?q=author%3ARemi-Gau" title="Bug reports">🐛</a> <a href="#userTesting-Remi-Gau" title="User Testing">📓</a> <a href="https://github.com/cpp-lln-lab/localizer_visual_motion/pulls?q=is%3Apr+reviewed-by%3ARemi-Gau" title="Reviewed Pull Requests">👀</a> <a href="#question-Remi-Gau" title="Answering Questions">💬</a> <a href="#infra-Remi-Gau" title="Infrastructure (Hosting, Build-Tools, etc)">🚇</a> <a href="#maintenance-Remi-Gau" title="Maintenance">🚧</a></td>
+    <td align="center"><a href="https://github.com/CerenB"><img src="https://avatars1.githubusercontent.com/u/10451654?v=4?s=100" width="100px;" alt=""/><br /><sub><b>CerenB</b></sub></a><br /><a href="https://github.com/cpp-lln-lab/localizer_visual_motion/issues?q=author%3ACerenB" title="Bug reports">🐛</a> <a href="#userTesting-CerenB" title="User Testing">📓</a></td>
+    <td align="center"><a href="https://github.com/iqrashahzad14"><img src="https://avatars.githubusercontent.com/u/75671348?v=4?s=100" width="100px;" alt=""/><br /><sub><b>iqrashahzad14</b></sub></a><br /><a href="https://github.com/cpp-lln-lab/localizer_visual_motion/commits?author=iqrashahzad14" title="Code">💻</a> <a href="#ideas-iqrashahzad14" title="Ideas, Planning, & Feedback">🤔</a></td>
   </tr>
 </table>
 
-<!-- markdownlint-enable -->
+<!-- markdownlint-restore -->
 <!-- prettier-ignore-end -->
+
 <!-- ALL-CONTRIBUTORS-LIST:END -->
 
-This project follows the [all-contributors](https://github.com/all-contributors/all-contributors) specification. Contributions of any kind welcome!
+This project follows the [all-contributors](https://github.com/all-contributors/all-contributors) specification. Contributions of any kind welcome!

README.md

@@ -1 +1 @@
-# Documentation
+# Documentation

docs/README.md

@@ -1,5 +1,5 @@
 % (C) Copyright 2020 Agah Karakuzu
-% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers
+% (C) Copyright 2019 CPP visual motion localizer developpers
 
 function initEnv
     % 1 - Check if version requirements

initEnv.m

@@ -1 +1 @@
-# External libraries and dependencies
+# External libraries and dependencies