fix doc

Author: Remi-Gau

docs/Makefile

@@ -18,6 +18,3 @@ help:
 # "make mode" option.  $(O) is meant as a shortcut for $(SPHINXOPTS).
 %: Makefile
 	@$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)
-
-doc:
-	@$(SPHINXBUILD) -b html "$(SOURCEDIR)" "$(BUILDDIR)"

src/defaults/check_cfg.m

@@ -14,38 +14,38 @@
     %
     % - :cfg: the option structure with missing values filled in by the defaults.
     %
-    % ``cfg`` fields::
+    % ``cfg`` fields:
     %
-    % :param entity_order: order of the entities in bids derivatives
-    % :param fwhm: value to append to smoothing desctiption label
-    % :param spec: specfication details to over ride some of the defaults
+    % - ``entity_order``: order of the entities in bids derivatives
+    % - ``fwhm``: value to append to smoothing desctiption label
+    % - ``spec``: specfication details to over ride some of the defaults
     %
     % BIDS derivatives defining fields:
     %
     % Each of those fields contain a structure that lists the BIDS suffix
     % and entities-label pairs for each type of preprocessed image.
     %
-    % :param segment:
-    % :param stc:
-    % :param realign_unwarp:
-    % :param real_param:
-    % :param mean:
-    % :param normalized_mean:
-    % :param preproc:
-    % :param preproc_norm:
-    % :param smooth:
-    % :param smooth_norm:
+    % - ``segment``
+    % - ``stc``
+    % - ``realign_unwarp``
+    % - ``real_param``
+    % - ``mean``
+    % - ``normalized_mean``
+    % - ``preproc``
+    % - ``preproc_norm``
+    % - ``smooth``
+    % - ``smooth_norm``
     %
-    % For example::
+    % For example:
+    %
+    % .. code-block:: matlab
     %
     %   % for grey matter segmentation output
     %   cfg.segment.gm = struct('entities', struct('space', 'individual', ...
     %                                              'label', x), ...
     %                           'suffix', 'probseg')
     %
     %
-    % :mapping: a n X 2 cell that maps a prefix ``mapping{i, 1}`` to a
-    %             to a given bids-derivatives name specification ``mapping{i, 2}``
     %
     % (C) Copyright 2021 spm_2_bids developers