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Remi-GauRemi-Gau
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Merge pull request #23 from Remi-Gau/ci
[INFRA] run CI with matlab on all OS
2 parents 4f4d15e + 7a104b6 commit 2614787

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‎.github/dependabot.yml‎

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---
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# Documentation
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# https://docs.github.com/en/code-security/dependabot/dependabot-version-updates/configuration-options-for-the-dependabot.yml-file
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version: 2
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updates:
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- package-ecosystem: 'github-actions'
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directory: '/'
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schedule:
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interval: 'weekly'
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- package-ecosystem: github-actions
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directory: /
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schedule:
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interval: weekly

‎.github/workflows/codespell.yml‎

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---
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name: codespell
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on:
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codespell:
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v3
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- uses: codespell-project/actions-codespell@master
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- uses: actions/checkout@v3
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- uses: codespell-project/actions-codespell@master

‎.github/workflows/matlab_test_and_coverage.yaml‎

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name: "MATLAB: test and coverage"
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---
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name: 'MATLAB: test and coverage'
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# Installs
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# - MATLAB github action
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on:
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push:
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branches: ["master", "main", "dev"]
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branches: [master, main, dev]
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pull_request:
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branches: ["*"]
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branches: ['*']
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jobs:
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matlab_tests:
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strategy:
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matrix:
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os: [ubuntu-latest] # "macos-latest" or "windows-latest" don't work (yet?)
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matlab-version: ["R2020a"] # add more versions if needed: "R2021a"
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version: [R2021a, R2021b, R2022a, R2022b, R2023a]
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os: [ubuntu-latest, macos-latest, windows-latest]
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fail-fast: false # Don't cancel all jobs if one fails
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runs-on: ${{ matrix.os }}
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steps:
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- name: Install MATLAB ${{ matrix.matlab-version }}
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uses: matlab-actions/[email protected]
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with:
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release: ${{ matrix.matlab-version }}
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- uses: actions/checkout@v3
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with:
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submodules: true
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fetch-depth: 1
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- name: Install Moxunit and MOcov
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run: |
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git clone https://github.com/MOxUnit/MOxUnit.git --depth 1
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git clone https://github.com/MOcov/MOcov.git --depth 1
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- name: Run tests
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uses: matlab-actions/[email protected]
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with:
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command:
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cd(fullfile(getenv('GITHUB_WORKSPACE'), '.github', 'workflows'));
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run run_tests_ci;
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- name: Check logs
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run: |
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cat test_report.log | grep 0
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bash <(curl -s https://codecov.io/bash)
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- name: Code coverage
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uses: codecov/codecov-action@v3
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with:
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file: coverage.xml # optional
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flags: matlab # optional
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name: codecov-umbrella # optional
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fail_ci_if_error: true # optional (default = false)
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- name: Install MATLAB
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uses: matlab-actions/[email protected]
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with:
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release: ${{ matrix.version }}
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- uses: actions/checkout@v3
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with:
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submodules: true
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fetch-depth: 1
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- name: Install Moxunit and MOcov
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run: |
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git clone https://github.com/MOxUnit/MOxUnit.git --depth 1
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git clone https://github.com/MOcov/MOcov.git --depth 1
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- name: Run tests
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uses: matlab-actions/[email protected]
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with:
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command: cd(fullfile(getenv('GITHUB_WORKSPACE'), '.github', 'workflows')); run run_tests_ci;
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- name: Check logs unix
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if: matrix.os == 'ubuntu-latest' || matrix.os == 'macos-latest'
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run: grep -q 0 test_report.log || { echo "Some tests failed. Check the 'Run tests' step to know which ones." >&2; exit 1; }
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- name: Check logs windows
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if: matrix.os == 'windows-latest'
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run: |
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if (-not (Get-Content test_report.log | Select-String -Pattern "0")) {
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throw "Some tests failed. Check the 'Run tests' step to know which ones."
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}
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- name: Code coverage
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if: matrix.os == 'ubuntu-latest' || matrix.os == 'macos-latest'
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# no coverage on windows as long as MOcov does not support it
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# see https://github.com/MOcov/MOcov/issues/28
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uses: codecov/codecov-action@v3
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with:
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file: coverage.xml # optional
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flags: ${{ matrix.os }}_matlab-${{ matrix.version }}
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name: codecov-umbrella # optional
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fail_ci_if_error: true # optional (default = false)

‎.github/workflows/miss_hit.yml‎

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---
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name: miss_hit
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on:
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push:
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branches:
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- main
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- dev
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- main
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- dev
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paths:
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- '**.m'
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- '.github/workflows/miss_hit.yml'
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- '**.m'
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- .github/workflows/miss_hit.yml
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pull_request:
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branches: ['*']
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paths:
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- '**.m'
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- '.github/workflows/miss_hit.yml'
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- '**.m'
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- .github/workflows/miss_hit.yml
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jobs:
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miss_hit:
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strategy:
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matrix:
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command: ["mh_style", "mh_metric --ci && mh_lint"]
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command: [mh_style, mh_metric --ci && mh_lint]
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fail-fast: true # cancel all jobs if one fails
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steps:
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- name: Set up Python
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uses: actions/setup-python@v4
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with:
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python-version: 3.9
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python-version: '3.11'
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- name: Install dependencies
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run: |

‎.github/workflows/octave_test_and_coverage.yml‎

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name: "Octave: test and coverage"
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---
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name: 'Octave: test and coverage'
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on:
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push:
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branches: ["master", "main", "dev"]
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branches: [master, main, dev]
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pull_request:
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branches: ["*"]
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branches: ['*']
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jobs:
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build:
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v3
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with:
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submodules: true
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fetch-depth: 1
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- uses: actions/checkout@v3
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with:
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submodules: true
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fetch-depth: 1
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- name: MOxUnit Action
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uses: joergbrech/[email protected]
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with:
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tests: tests
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src: src
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with_coverage: true
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cover_xml_file: coverage.xml
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- name: MOxUnit Action
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uses: joergbrech/[email protected]
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with:
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tests: tests
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src: src
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with_coverage: true
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cover_xml_file: coverage.xml
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- name: Code coverage
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uses: codecov/codecov-action@v3
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with:
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token: ${{ secrets.CODECOV_TOKEN }} # not required for public repos
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file: coverage.xml # optional
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flags: unittests # optional
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name: codecov-umbrella # optional
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fail_ci_if_error: true # optional (default = false)
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- name: Code coverage
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uses: codecov/codecov-action@v3
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with:
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token: ${{ secrets.CODECOV_TOKEN }} # not required for public repos
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file: coverage.xml # optional
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flags: octave # optional
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name: codecov-umbrella # optional
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fail_ci_if_error: true # optional (default = false)

‎.github/workflows/validate_cff.yml‎

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---
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name: validate CITATION.cff
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on:
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push:
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branches: ['*']
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paths:
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- 'CITATION.cff'
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- '.github/workflows/validate_cff.yml'
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- CITATION.cff
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- .github/workflows/validate_cff.yml
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pull_request:
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branches: ['*']
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paths:
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- 'CITATION.cff'
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- '.github/workflows/validate_cff.yml'
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- CITATION.cff
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- .github/workflows/validate_cff.yml
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jobs:
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- name: Set up Python
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uses: actions/setup-python@v4
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with:
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python-version: 3.9
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python-version: '3.11'
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- name: Install dependencies
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run: |

‎.pre-commit-config.yaml‎

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---
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# See https://pre-commit.com/
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# and https://pre-commit.ci/
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# for details
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repos:
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- repo: local
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hooks:
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- id: mh_version
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name: mh_version
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entry: mh_style
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args: [-v]
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verbose: true
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language: python
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additional_dependencies: [miss_hit_core]
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- id: mh_style
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name: mh_style
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entry: mh_style
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args: [--process-slx, --fix]
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files: ^(.*\.(m|slx))$
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language: python
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additional_dependencies: [miss_hit_core]
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- id: mh_metric
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name: mh_metric
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entry: mh_metric
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args: [--ci]
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files: ^(.*\.(m|slx))$
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language: python
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additional_dependencies: [miss_hit_core]
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- id: mh_lint
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name: mh_lint
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entry: mh_lint
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files: ^(.*\.(m|slx))$
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language: python
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additional_dependencies: [miss_hit]
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- repo: local
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hooks:
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- id: mh_version
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name: mh_version
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entry: mh_style
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args: [-v]
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verbose: true
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language: python
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additional_dependencies: [miss_hit_core]
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- id: mh_style
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name: mh_style
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entry: mh_style
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args: [--process-slx, --fix]
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files: ^(.*\.(m|slx))$
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language: python
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additional_dependencies: [miss_hit_core]
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- id: mh_metric
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name: mh_metric
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entry: mh_metric
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args: [--ci]
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files: ^(.*\.(m|slx))$
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language: python
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additional_dependencies: [miss_hit_core]
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- id: mh_lint
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name: mh_lint
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entry: mh_lint
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files: ^(.*\.(m|slx))$
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language: python
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additional_dependencies: [miss_hit]
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- repo: https://github.com/pre-commit/pre-commit-hooks
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rev: v4.4.0
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hooks:
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- id: trailing-whitespace
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- id: end-of-file-fixer
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- id: check-yaml
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- id: check-added-large-files
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- id: trailing-whitespace
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- id: end-of-file-fixer
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- id: check-yaml
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- id: check-added-large-files
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- repo: https://github.com/codespell-project/codespell
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rev: v2.2.4
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hooks:
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- id: codespell
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- repo: https://github.com/jumanjihouse/pre-commit-hook-yamlfmt
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rev: 0.2.2
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hooks:
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- id: yamlfmt
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args: [--mapping, '2', --sequence, '2', --offset, '0']

‎.readthedocs.yml‎

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# Read the Docs configuration file
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# See https://docs.readthedocs.io/en/stable/config-file/v2.html for details
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# Optionally build your docs in additional formats such as PDF
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formats:
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- pdf
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- pdf
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# Optionally set the version of Python and requirements required to build your docs
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python:
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version: 3.8
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install:
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- requirements: requirements.txt
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- requirements: requirements.txt

‎binder/environment.yml‎

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channels:
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- default

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