Skip to content

Commit 1bbd7e9

Browse files
committed
v1.0.7
1 parent 5bfbe15 commit 1bbd7e9

File tree

11 files changed

+785
-780
lines changed

11 files changed

+785
-780
lines changed

.pre-commit-config.yaml

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -6,8 +6,8 @@ repos:
66
language_version: python3.11
77
- repo: local
88
hooks:
9-
- id: pytest-check
10-
name: pytest-check
9+
- id: pytest
10+
name: pytest
1111
entry: pytest
1212
language: system
1313
pass_filenames: false

docs/build/html/_modules/index.html

Lines changed: 8 additions & 8 deletions
Original file line numberDiff line numberDiff line change
@@ -9,25 +9,25 @@
99
<!--[if lt IE 9]>
1010
<script src="../_static/js/html5shiv.min.js"></script>
1111
<![endif]-->
12-
12+
1313
<script src="../_static/jquery.js?v=5d32c60e"></script>
1414
<script src="../_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
1515
<script src="../_static/documentation_options.js?v=e2a723ec"></script>
1616
<script src="../_static/doctools.js?v=888ff710"></script>
1717
<script src="../_static/sphinx_highlight.js?v=dc90522c"></script>
1818
<script src="../_static/js/theme.js"></script>
1919
<link rel="index" title="Index" href="../genindex.html" />
20-
<link rel="search" title="Search" href="../search.html" />
20+
<link rel="search" title="Search" href="../search.html" />
2121
</head>
2222

23-
<body class="wy-body-for-nav">
23+
<body class="wy-body-for-nav">
2424
<div class="wy-grid-for-nav">
2525
<nav data-toggle="wy-nav-shift" class="wy-nav-side">
2626
<div class="wy-side-scroll">
2727
<div class="wy-side-nav-search" >
2828

29-
30-
29+
30+
3131
<a href="../index.html" class="icon icon-home">
3232
scrapemed
3333
</a>
@@ -66,7 +66,7 @@
6666
</div>
6767
<div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
6868
<div itemprop="articleBody">
69-
69+
7070
<h1>All modules for which code is available</h1>
7171
<ul><li><a href="scrapemed/paper.html">scrapemed.paper</a></li>
7272
<li><a href="scrapemed/paperSet.html">scrapemed.paperSet</a></li>
@@ -88,7 +88,7 @@ <h1>All modules for which code is available</h1>
8888
Built with <a href="https://www.sphinx-doc.org/">Sphinx</a> using a
8989
<a href="https://github.com/readthedocs/sphinx_rtd_theme">theme</a>
9090
provided by <a href="https://readthedocs.org">Read the Docs</a>.
91-
91+
9292

9393
</footer>
9494
</div>
@@ -99,7 +99,7 @@ <h1>All modules for which code is available</h1>
9999
jQuery(function () {
100100
SphinxRtdTheme.Navigation.enable(true);
101101
});
102-
</script>
102+
</script>
103103

104104
</body>
105105
</html>

docs/build/html/_modules/scrapemed/trees.html

Lines changed: 8 additions & 8 deletions
Original file line numberDiff line numberDiff line change
@@ -9,25 +9,25 @@
99
<!--[if lt IE 9]>
1010
<script src="../../_static/js/html5shiv.min.js"></script>
1111
<![endif]-->
12-
12+
1313
<script src="../../_static/jquery.js?v=5d32c60e"></script>
1414
<script src="../../_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
1515
<script src="../../_static/documentation_options.js?v=e2a723ec"></script>
1616
<script src="../../_static/doctools.js?v=888ff710"></script>
1717
<script src="../../_static/sphinx_highlight.js?v=dc90522c"></script>
1818
<script src="../../_static/js/theme.js"></script>
1919
<link rel="index" title="Index" href="../../genindex.html" />
20-
<link rel="search" title="Search" href="../../search.html" />
20+
<link rel="search" title="Search" href="../../search.html" />
2121
</head>
2222

23-
<body class="wy-body-for-nav">
23+
<body class="wy-body-for-nav">
2424
<div class="wy-grid-for-nav">
2525
<nav data-toggle="wy-nav-shift" class="wy-nav-side">
2626
<div class="wy-side-scroll">
2727
<div class="wy-side-nav-search" >
2828

29-
30-
29+
30+
3131
<a href="../../index.html" class="icon icon-home">
3232
scrapemed
3333
</a>
@@ -67,7 +67,7 @@
6767
</div>
6868
<div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
6969
<div itemprop="articleBody">
70-
70+
7171
<h1>Source code for scrapemed.trees</h1><div class="highlight"><pre>
7272
<span></span><span class="sd">&quot;&quot;&quot;</span>
7373
<span class="sd">Scrapemed&#39;s &quot;trees&quot; module handles PMC article tree visualizations,</span>
@@ -216,7 +216,7 @@ <h1>Source code for scrapemed.trees</h1><div class="highlight"><pre>
216216
Built with <a href="https://www.sphinx-doc.org/">Sphinx</a> using a
217217
<a href="https://github.com/readthedocs/sphinx_rtd_theme">theme</a>
218218
provided by <a href="https://readthedocs.org">Read the Docs</a>.
219-
219+
220220

221221
</footer>
222222
</div>
@@ -227,7 +227,7 @@ <h1>Source code for scrapemed.trees</h1><div class="highlight"><pre>
227227
jQuery(function () {
228228
SphinxRtdTheme.Navigation.enable(true);
229229
});
230-
</script>
230+
</script>
231231

232232
</body>
233233
</html>

docs/build/html/_static/css/fonts/fontawesome-webfont.svg

Lines changed: 709 additions & 709 deletions
Loading

docs/build/html/genindex.html

Lines changed: 9 additions & 9 deletions
Original file line numberDiff line numberDiff line change
@@ -9,25 +9,25 @@
99
<!--[if lt IE 9]>
1010
<script src="_static/js/html5shiv.min.js"></script>
1111
<![endif]-->
12-
12+
1313
<script src="_static/jquery.js?v=5d32c60e"></script>
1414
<script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
1515
<script src="_static/documentation_options.js?v=e2a723ec"></script>
1616
<script src="_static/doctools.js?v=888ff710"></script>
1717
<script src="_static/sphinx_highlight.js?v=dc90522c"></script>
1818
<script src="_static/js/theme.js"></script>
1919
<link rel="index" title="Index" href="#" />
20-
<link rel="search" title="Search" href="search.html" />
20+
<link rel="search" title="Search" href="search.html" />
2121
</head>
2222

23-
<body class="wy-body-for-nav">
23+
<body class="wy-body-for-nav">
2424
<div class="wy-grid-for-nav">
2525
<nav data-toggle="wy-nav-shift" class="wy-nav-side">
2626
<div class="wy-side-scroll">
2727
<div class="wy-side-nav-search" >
2828

29-
30-
29+
30+
3131
<a href="index.html" class="icon icon-home">
3232
scrapemed
3333
</a>
@@ -66,7 +66,7 @@
6666
</div>
6767
<div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
6868
<div itemprop="articleBody">
69-
69+
7070

7171
<h1 id="index">Index</h1>
7272

@@ -86,7 +86,7 @@ <h1 id="index">Index</h1>
8686
| <a href="#T"><strong>T</strong></a>
8787
| <a href="#V"><strong>V</strong></a>
8888
| <a href="#X"><strong>X</strong></a>
89-
89+
9090
</div>
9191
<h2 id="A">A</h2>
9292
<table style="width: 100%" class="indextable genindextable"><tr>
@@ -344,7 +344,7 @@ <h2 id="X">X</h2>
344344
Built with <a href="https://www.sphinx-doc.org/">Sphinx</a> using a
345345
<a href="https://github.com/readthedocs/sphinx_rtd_theme">theme</a>
346346
provided by <a href="https://readthedocs.org">Read the Docs</a>.
347-
347+
348348

349349
</footer>
350350
</div>
@@ -355,7 +355,7 @@ <h2 id="X">X</h2>
355355
jQuery(function () {
356356
SphinxRtdTheme.Navigation.enable(true);
357357
});
358-
</script>
358+
</script>
359359

360360
</body>
361361
</html>

docs/build/html/index.html

Lines changed: 8 additions & 8 deletions
Original file line numberDiff line numberDiff line change
@@ -10,7 +10,7 @@
1010
<!--[if lt IE 9]>
1111
<script src="_static/js/html5shiv.min.js"></script>
1212
<![endif]-->
13-
13+
1414
<script src="_static/jquery.js?v=5d32c60e"></script>
1515
<script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
1616
<script src="_static/documentation_options.js?v=e2a723ec"></script>
@@ -19,17 +19,17 @@
1919
<script src="_static/js/theme.js"></script>
2020
<link rel="index" title="Index" href="genindex.html" />
2121
<link rel="search" title="Search" href="search.html" />
22-
<link rel="next" title="scrapemed" href="modules.html" />
22+
<link rel="next" title="scrapemed" href="modules.html" />
2323
</head>
2424

25-
<body class="wy-body-for-nav">
25+
<body class="wy-body-for-nav">
2626
<div class="wy-grid-for-nav">
2727
<nav data-toggle="wy-nav-shift" class="wy-nav-side">
2828
<div class="wy-side-scroll">
2929
<div class="wy-side-nav-search" >
3030

31-
32-
31+
32+
3333
<a href="#" class="icon icon-home">
3434
scrapemed
3535
</a>
@@ -69,7 +69,7 @@
6969
</div>
7070
<div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
7171
<div itemprop="articleBody">
72-
72+
7373
<section id="welcome-to-scrapemed-s-documentation">
7474
<h1>Welcome to scrapemed’s documentation!<a class="headerlink" href="#welcome-to-scrapemed-s-documentation" title="Link to this heading"></a></h1>
7575
<p>ScrapeMed is a powerful, easy to use, data scraping tool for PubMed Central (PMC) data.
@@ -135,7 +135,7 @@ <h1>Indices and tables<a class="headerlink" href="#indices-and-tables" title="Li
135135
Built with <a href="https://www.sphinx-doc.org/">Sphinx</a> using a
136136
<a href="https://github.com/readthedocs/sphinx_rtd_theme">theme</a>
137137
provided by <a href="https://readthedocs.org">Read the Docs</a>.
138-
138+
139139

140140
</footer>
141141
</div>
@@ -146,7 +146,7 @@ <h1>Indices and tables<a class="headerlink" href="#indices-and-tables" title="Li
146146
jQuery(function () {
147147
SphinxRtdTheme.Navigation.enable(true);
148148
});
149-
</script>
149+
</script>
150150

151151
</body>
152152
</html>

docs/build/html/modules.html

Lines changed: 8 additions & 8 deletions
Original file line numberDiff line numberDiff line change
@@ -10,7 +10,7 @@
1010
<!--[if lt IE 9]>
1111
<script src="_static/js/html5shiv.min.js"></script>
1212
<![endif]-->
13-
13+
1414
<script src="_static/jquery.js?v=5d32c60e"></script>
1515
<script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
1616
<script src="_static/documentation_options.js?v=e2a723ec"></script>
@@ -20,17 +20,17 @@
2020
<link rel="index" title="Index" href="genindex.html" />
2121
<link rel="search" title="Search" href="search.html" />
2222
<link rel="next" title="scrapemed package" href="scrapemed.html" />
23-
<link rel="prev" title="Welcome to scrapemed’s documentation!" href="index.html" />
23+
<link rel="prev" title="Welcome to scrapemed’s documentation!" href="index.html" />
2424
</head>
2525

26-
<body class="wy-body-for-nav">
26+
<body class="wy-body-for-nav">
2727
<div class="wy-grid-for-nav">
2828
<nav data-toggle="wy-nav-shift" class="wy-nav-side">
2929
<div class="wy-side-scroll">
3030
<div class="wy-side-nav-search" >
3131

32-
33-
32+
33+
3434
<a href="index.html" class="icon icon-home">
3535
scrapemed
3636
</a>
@@ -73,7 +73,7 @@
7373
</div>
7474
<div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
7575
<div itemprop="articleBody">
76-
76+
7777
<section id="scrapemed">
7878
<h1>scrapemed<a class="headerlink" href="#scrapemed" title="Link to this heading"></a></h1>
7979
<div class="toctree-wrapper compound">
@@ -159,7 +159,7 @@ <h1>scrapemed<a class="headerlink" href="#scrapemed" title="Link to this heading
159159
Built with <a href="https://www.sphinx-doc.org/">Sphinx</a> using a
160160
<a href="https://github.com/readthedocs/sphinx_rtd_theme">theme</a>
161161
provided by <a href="https://readthedocs.org">Read the Docs</a>.
162-
162+
163163

164164
</footer>
165165
</div>
@@ -170,7 +170,7 @@ <h1>scrapemed<a class="headerlink" href="#scrapemed" title="Link to this heading
170170
jQuery(function () {
171171
SphinxRtdTheme.Navigation.enable(true);
172172
});
173-
</script>
173+
</script>
174174

175175
</body>
176176
</html>

docs/build/html/py-modindex.html

Lines changed: 8 additions & 8 deletions
Original file line numberDiff line numberDiff line change
@@ -9,7 +9,7 @@
99
<!--[if lt IE 9]>
1010
<script src="_static/js/html5shiv.min.js"></script>
1111
<![endif]-->
12-
12+
1313
<script src="_static/jquery.js?v=5d32c60e"></script>
1414
<script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
1515
<script src="_static/documentation_options.js?v=e2a723ec"></script>
@@ -18,19 +18,19 @@
1818
<script src="_static/js/theme.js"></script>
1919
<link rel="index" title="Index" href="genindex.html" />
2020
<link rel="search" title="Search" href="search.html" />
21-
21+
2222

2323

2424
</head>
2525

26-
<body class="wy-body-for-nav">
26+
<body class="wy-body-for-nav">
2727
<div class="wy-grid-for-nav">
2828
<nav data-toggle="wy-nav-shift" class="wy-nav-side">
2929
<div class="wy-side-scroll">
3030
<div class="wy-side-nav-search" >
3131

32-
33-
32+
33+
3434
<a href="index.html" class="icon icon-home">
3535
scrapemed
3636
</a>
@@ -69,7 +69,7 @@
6969
</div>
7070
<div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
7171
<div itemprop="articleBody">
72-
72+
7373

7474
<h1>Python Module Index</h1>
7575

@@ -128,7 +128,7 @@ <h1>Python Module Index</h1>
128128
Built with <a href="https://www.sphinx-doc.org/">Sphinx</a> using a
129129
<a href="https://github.com/readthedocs/sphinx_rtd_theme">theme</a>
130130
provided by <a href="https://readthedocs.org">Read the Docs</a>.
131-
131+
132132

133133
</footer>
134134
</div>
@@ -139,7 +139,7 @@ <h1>Python Module Index</h1>
139139
jQuery(function () {
140140
SphinxRtdTheme.Navigation.enable(true);
141141
});
142-
</script>
142+
</script>
143143

144144
</body>
145145
</html>

0 commit comments

Comments
 (0)