fix NAXE age onset range and update age onset plot (#224)

## Description

Gix NAXE age onset range and update age onset plot

## Minor Changes

- NAXE age of onset ranges were 0 - 0 and 1 - 1. Changed to only
reporting a single range: 1 - 1 (single case of 13 month old)
- Update age of onset plot
- Update citations json to remove duplicates

## Checklist

- [x] All changes are well summarized
- [x] Check all tests pass
- [x] Check that the website preview looks good
- [ ] Update the STRchive version in `CITATION.cff`, format X.Y.Z. If
any major changes, increment Y. If only minor changes, increment Z. If
the breaking change (rare), increment X.
- [x] Ask someone to review this PR

---------

Co-authored-by: hdashnow <3794821+hdashnow@users.noreply.github.com>

Author: hdashnow

data/STRchive-loci.json

@@ -2595,8 +2595,8 @@
   "age_onset": "Single repeat expansion case had onset at 13 months, while NAXE-related mitochondrial encephalopathy more generally has predominately infantile onset, extending to 20y or older [@pmid:39455596].",
   "age_onset_min": 1,
   "age_onset_max": 1,
-  "typ_age_onset_min": 0,
-  "typ_age_onset_max": 0,
+  "typ_age_onset_min": null,
+  "typ_age_onset_max": null,
   "novel": "ref",
   "mechanism": "LoF",
   "mechanism_detail": "Reduced NAXE expression from expansion in promoter; hypermethylation was detected at and downstream of the repeat sequence in the proband as well as the maternal copy of the expanded allele, which was not present in the maternal normal range allele nor in the controls [@pmid:39455596]",

data/plots/age-onset.json

@@ -1,7 +1,7 @@
 {
   "data": [
   {
-    "base": [32, 31, 28, 23, 22, 21, 20, 20, 0, 18, 18, 18, 16, 15, 14, 12, 12, 0, 12, 11, 10, 10, 10, 10, 10, 0, 8, 8, 7, 7, 6, 0, 4, 4, 3, 3, 3, 2, 0, 0, 2, 0, 1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0],
+    "base": [32, 31, 28, 23, 22, 21, 20, 20, 0, 18, 18, 18, 16, 15, 14, 12, 0, 12, 11, 10, 10, 10, 10, 10, 0, 8, 8, 8, 7, 7, 6, 0, 4, 4, 3, 3, 3, 2, 0, 0, 2, 0, 1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0],
     "hovertemplate": "Disease: %{y} \u003cbr\u003e Range onset: %{base} - %{x} years",
     "legendgroup": "AD",
     "marker":
@@ -12,8 +12,8 @@
     "offset": -0.1,
     "orientation": "h",
     "width": 0.2,
-    "x": [47, 32, 39, 51, 43, 66, 71, 59, 0, 46, 52, 19, 57, 25, 56, 54, 56, 0, 53, 72, 40, 36, 68, 20, 23, 0, 75, 54, 59, 61, 57, 0, 56, 47, 70, 10, 59, 84, 0, 0, 1, 0, 6, 84, 0, 0, 0, 72, 65, 76, 73, 3, 74, 0, 36, 0, 0],
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+    "x": [47, 32, 39, 51, 43, 66, 71, 59, 0, 46, 52, 19, 57, 25, 56, 54, 0, 53, 72, 40, 36, 68, 20, 23, 0, 75, 54, 60, 59, 61, 57, 0, 56, 47, 70, 10, 59, 84, 0, 0, 1, 0, 6, 84, 0, 0, 0, 72, 65, 76, 73, 3, 74, 0, 36, 0, 0],
+    "y": ["FECD3", "CJD", "SCA36", "FAME6", "MRUPAV", "SCA27B", "FTDALS1", "OPMD", "CANVAS", "SCA37", "ADTKD", "FAME7", "SCA6", "OPML1", "OPDM2", "HDL2", "XDP", "SCA4", "SCA10", "OPDM5", "FAME3", "NIID", "OPDM4", "FAME4", "SBMA", "SCA31", "SCA12", "FAME1", "OPDM1", "FAME8", "SCA1", "EPM1", "FAME2", "SCA", "SCA3, MJD", "EDM1, PSACH", "SCA17", "SCA2", "FRDA", "GDPAG", "FRA7A", "FRAXE", "FRA2A", "HD", "NME", "EIEE1", "PRTS", "DRPLA", "SCA7", "SCA8", "DM2", "FRA12A", "DM1", "FXS, FXTAS, POF1", "CCHS", "XLMR", "HMNR7"],
     "type": "bar"
   },
   {
@@ -29,7 +29,7 @@
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+    "y": ["FECD3", "CJD", "SCA36", "FAME6", "MRUPAV", "SCA27B", "FTDALS1", "OPMD", "CANVAS", "SCA37", "ADTKD", "FAME7", "SCA6", "OPML1", "OPDM2", "HDL2", "XDP", "SCA4", "SCA10", "OPDM5", "FAME3", "NIID", "OPDM4", "FAME4", "SBMA", "SCA31", "SCA12", "FAME1", "OPDM1", "FAME8", "SCA1", "EPM1", "FAME2", "SCA", "SCA3, MJD", "EDM1, PSACH", "SCA17", "SCA2", "FRDA", "GDPAG", "FRA7A", "FRAXE", "FRA2A", "HD", "NME", "EIEE1", "PRTS", "DRPLA", "SCA7", "SCA8", "DM2", "FRA12A", "DM1", "FXS, FXTAS, POF1", "CCHS", "XLMR", "HMNR7"],
     "type": "bar"
   },
   {
@@ -45,11 +45,11 @@
     "orientation": "h",
     "width": 0.2,
     "x": [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 78, 0, 0, 0],
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+    "y": ["FECD3", "CJD", "SCA36", "FAME6", "MRUPAV", "SCA27B", "FTDALS1", "OPMD", "CANVAS", "SCA37", "ADTKD", "FAME7", "SCA6", "OPML1", "OPDM2", "HDL2", "XDP", "SCA4", "SCA10", "OPDM5", "FAME3", "NIID", "OPDM4", "FAME4", "SBMA", "SCA31", "SCA12", "FAME1", "OPDM1", "FAME8", "SCA1", "EPM1", "FAME2", "SCA", "SCA3, MJD", "EDM1, PSACH", "SCA17", "SCA2", "FRDA", "GDPAG", "FRA7A", "FRAXE", "FRA2A", "HD", "NME", "EIEE1", "PRTS", "DRPLA", "SCA7", "SCA8", "DM2", "FRA12A", "DM1", "FXS, FXTAS, POF1", "CCHS", "XLMR", "HMNR7"],
     "type": "bar"
   },
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     "hovertemplate": "Disease: %{y} \u003cbr\u003e Range onset: %{base} - %{x} years",
     "legendgroup": "XR",
     "marker":
@@ -60,12 +60,12 @@
     "offset": -0.1,
     "orientation": "h",
     "width": 0.2,
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+    "x": [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 67, 0, 0, 0, 0, 0, 0, 0, 75, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 4, 4, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0],
+    "y": ["FECD3", "CJD", "SCA36", "FAME6", "MRUPAV", "SCA27B", "FTDALS1", "OPMD", "CANVAS", "SCA37", "ADTKD", "FAME7", "SCA6", "OPML1", "OPDM2", "HDL2", "XDP", "SCA4", "SCA10", "OPDM5", "FAME3", "NIID", "OPDM4", "FAME4", "SBMA", "SCA31", "SCA12", "FAME1", "OPDM1", "FAME8", "SCA1", "EPM1", "FAME2", "SCA", "SCA3, MJD", "EDM1, PSACH", "SCA17", "SCA2", "FRDA", "GDPAG", "FRA7A", "FRAXE", "FRA2A", "HD", "NME", "EIEE1", "PRTS", "DRPLA", "SCA7", "SCA8", "DM2", "FRA12A", "DM1", "FXS, FXTAS, POF1", "CCHS", "XLMR", "HMNR7"],
     "type": "bar"
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-    "base": [40.0, 50.0, 40.0, 0, 0, 42.0, 50.0, 40.0, 0, 33.0, 0, 0, 43.0, 0, 20.0, 30.0, 21.0, 0, 37.0, 12.0, 24, 0, 30.0, 18.0, 0, 0, 56.0, 26.0, 31.0, 0, 20.0, 0, 12.0, 0, 10.0, 0, 19.0, 30.0, 0, 0, 0, 0, 0, 35.0, 0, 0, 0, 20.0, 4.0, 20.0, 28.0, 0, 10.0, 0, 0.0, 0, 0],
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     "hovertemplate": "Disease: %{y} \u003cbr\u003e Typical onset: %{base} - %{x} years",
     "legendgroup": "AD",
     "marker":
@@ -77,8 +77,8 @@
     "orientation": "h",
     "showlegend": false,
     "width": 0.6,
-    "x": [19.0, 10.0, 20.0, 0, 0, 28.0, 14.0, 19.0, 0, 20.0, 0, 0, 9.0, 0, 14.0, 22.0, 18.0, 0, 19.0, 36.0, 6, 0, 40.0, 12.0, 0, 0, 6.0, 24.0, 20.0, 0, 19.0, 0, 18.0, 0, 39.0, 0, 29.0, 9.0, 0, 0, 0, 0, 0, 9.0, 0, 0, 0, 20.0, 44.0, 29.0, 28.0, 0, 20.0, 0, 2.0, 0, 0],
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+    "x": [19.0, 10.0, 20.0, 0, 0, 28.0, 14.0, 19.0, 0, 20.0, 0, 0, 9.0, 0, 14.0, 22.0, 0, 19.0, 36.0, 6, 0, 40.0, 12.0, 0, 0, 6.0, 24.0, 18.0, 20.0, 0, 19.0, 0, 18.0, 0, 39.0, 0, 29.0, 9.0, 0, 0, 0, 0, 0, 9.0, 0, 0, 0, 20.0, 44.0, 29.0, 28.0, 0, 20.0, 0, 2.0, 0, 0],
+    "y": ["FECD3", "CJD", "SCA36", "FAME6", "MRUPAV", "SCA27B", "FTDALS1", "OPMD", "CANVAS", "SCA37", "ADTKD", "FAME7", "SCA6", "OPML1", "OPDM2", "HDL2", "XDP", "SCA4", "SCA10", "OPDM5", "FAME3", "NIID", "OPDM4", "FAME4", "SBMA", "SCA31", "SCA12", "FAME1", "OPDM1", "FAME8", "SCA1", "EPM1", "FAME2", "SCA", "SCA3, MJD", "EDM1, PSACH", "SCA17", "SCA2", "FRDA", "GDPAG", "FRA7A", "FRAXE", "FRA2A", "HD", "NME", "EIEE1", "PRTS", "DRPLA", "SCA7", "SCA8", "DM2", "FRA12A", "DM1", "FXS, FXTAS, POF1", "CCHS", "XLMR", "HMNR7"],
     "type": "bar"
   },
   {
@@ -95,7 +95,7 @@
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     "width": 0.6,
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+    "y": ["FECD3", "CJD", "SCA36", "FAME6", "MRUPAV", "SCA27B", "FTDALS1", "OPMD", "CANVAS", "SCA37", "ADTKD", "FAME7", "SCA6", "OPML1", "OPDM2", "HDL2", "XDP", "SCA4", "SCA10", "OPDM5", "FAME3", "NIID", "OPDM4", "FAME4", "SBMA", "SCA31", "SCA12", "FAME1", "OPDM1", "FAME8", "SCA1", "EPM1", "FAME2", "SCA", "SCA3, MJD", "EDM1, PSACH", "SCA17", "SCA2", "FRDA", "GDPAG", "FRA7A", "FRAXE", "FRA2A", "HD", "NME", "EIEE1", "PRTS", "DRPLA", "SCA7", "SCA8", "DM2", "FRA12A", "DM1", "FXS, FXTAS, POF1", "CCHS", "XLMR", "HMNR7"],
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@@ -112,11 +112,11 @@
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+    "y": ["FECD3", "CJD", "SCA36", "FAME6", "MRUPAV", "SCA27B", "FTDALS1", "OPMD", "CANVAS", "SCA37", "ADTKD", "FAME7", "SCA6", "OPML1", "OPDM2", "HDL2", "XDP", "SCA4", "SCA10", "OPDM5", "FAME3", "NIID", "OPDM4", "FAME4", "SBMA", "SCA31", "SCA12", "FAME1", "OPDM1", "FAME8", "SCA1", "EPM1", "FAME2", "SCA", "SCA3, MJD", "EDM1, PSACH", "SCA17", "SCA2", "FRDA", "GDPAG", "FRA7A", "FRAXE", "FRA2A", "HD", "NME", "EIEE1", "PRTS", "DRPLA", "SCA7", "SCA8", "DM2", "FRA12A", "DM1", "FXS, FXTAS, POF1", "CCHS", "XLMR", "HMNR7"],
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     "legendgroup": "XR",
     "marker":
@@ -128,8 +128,8 @@
     "orientation": "h",
     "showlegend": false,
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-    "x": [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.0, 0, 0, 0, 0, 0, 0, 0, 29.0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 8.0, 0, 0, 0, 0.0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0],
-    "y": ["FECD3", "CJD", "SCA36", "FAME6", "MRUPAV", "SCA27B", "FTDALS1", "OPMD", "CANVAS", "SCA37", "ADTKD", "FAME7", "SCA6", "OPML1", "OPDM2", "HDL2", "FAME1", "XDP", "SCA4", "SCA10", "OPDM5", "FAME3", "NIID", "OPDM4", "FAME4", "SBMA", "SCA31", "SCA12", "OPDM1", "FAME8", "SCA1", "EPM1", "FAME2", "SCA", "SCA3, MJD", "EDM1, PSACH", "SCA17", "SCA2", "FRDA", "GDPAG", "FRA7A", "FRAXE", "FRA2A", "HD", "NME", "EIEE1", "PRTS", "DRPLA", "SCA7", "SCA8", "DM2", "FRA12A", "DM1", "FXS, FXTAS, POF1", "CCHS", "XLMR", "HMNR7"],
+    "x": [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.0, 0, 0, 0, 0, 0, 0, 0, 29.0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 8.0, 0, 0, 0, 0.0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0],
+    "y": ["FECD3", "CJD", "SCA36", "FAME6", "MRUPAV", "SCA27B", "FTDALS1", "OPMD", "CANVAS", "SCA37", "ADTKD", "FAME7", "SCA6", "OPML1", "OPDM2", "HDL2", "XDP", "SCA4", "SCA10", "OPDM5", "FAME3", "NIID", "OPDM4", "FAME4", "SBMA", "SCA31", "SCA12", "FAME1", "OPDM1", "FAME8", "SCA1", "EPM1", "FAME2", "SCA", "SCA3, MJD", "EDM1, PSACH", "SCA17", "SCA2", "FRDA", "GDPAG", "FRA7A", "FRAXE", "FRA2A", "HD", "NME", "EIEE1", "PRTS", "DRPLA", "SCA7", "SCA8", "DM2", "FRA12A", "DM1", "FXS, FXTAS, POF1", "CCHS", "XLMR", "HMNR7"],
     "type": "bar"
   },
   {
@@ -727,7 +727,7 @@
     "yaxis":
     {
       "tickmode": "array",
-      "tickvals": ["FECD3", "CJD", "SCA36", "FAME6", "MRUPAV", "SCA27B", "FTDALS1", "OPMD", "CANVAS", "SCA37", "ADTKD", "FAME7", "SCA6", "OPML1", "OPDM2", "HDL2", "FAME1", "XDP", "SCA4", "SCA10", "OPDM5", "FAME3", "NIID", "OPDM4", "FAME4", "SBMA", "SCA31", "SCA12", "OPDM1", "FAME8", "SCA1", "EPM1", "FAME2", "SCA", "SCA3, MJD", "EDM1, PSACH", "SCA17", "SCA2", "FRDA", "GDPAG", "FRA7A", "FRAXE", "FRA2A", "HD", "NME", "EIEE1", "PRTS", "DRPLA", "SCA7", "SCA8", "DM2", "FRA12A", "DM1", "FXS, FXTAS, POF1", "CCHS", "XLMR", "HMNR7"],
+      "tickvals": ["FECD3", "CJD", "SCA36", "FAME6", "MRUPAV", "SCA27B", "FTDALS1", "OPMD", "CANVAS", "SCA37", "ADTKD", "FAME7", "SCA6", "OPML1", "OPDM2", "HDL2", "XDP", "SCA4", "SCA10", "OPDM5", "FAME3", "NIID", "OPDM4", "FAME4", "SBMA", "SCA31", "SCA12", "FAME1", "OPDM1", "FAME8", "SCA1", "EPM1", "FAME2", "SCA", "SCA3, MJD", "EDM1, PSACH", "SCA17", "SCA2", "FRDA", "GDPAG", "FRA7A", "FRAXE", "FRA2A", "HD", "NME", "EIEE1", "PRTS", "DRPLA", "SCA7", "SCA8", "DM2", "FRA12A", "DM1", "FXS, FXTAS, POF1", "CCHS", "XLMR", "HMNR7"],
       "title":
       {
         "text": "Disease"