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1 | 1 | # Python API Notebooks |
2 | 2 |
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3 | | -This directory contains iPython notebooks that use the Python API to |
4 | | -perform various statistical analyses on interesting datasets. You can click on |
5 | | -each link to see a live colab version. |
| 3 | +This directory contains Colab notebooks that use the V1 Python API. For current notebooks, see the `v2` directory. |
6 | 4 |
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7 | 5 | Notebook | Description |
8 | 6 | -------- | ----------- |
9 | | -[`analyzing_census_data.ipynb`](https://colab.research.google.com/drive/1wYohDirOgVxvmL0d-oJRWdD6AXfAX_w1) | A notebook that analyzes the relationship between population size and median age for each State, County, and City in the United States. |
10 | | -[`COVID_19_Feature_Exploration_Analysis_with_Data_Commons.ipynb`](https://colab.research.google.com/drive/1LLteGjXifwSsD-YsGwBnI-i96G777Q7j) | A notebook that explores how COVID-19 cases trends differ across different counties, and examines hundreds of variables across dozens of sources to see which variables are potentially correlated with COVID-19 mortality rate. |
11 | | -[`analyzing_income_distribution.ipynb`](https://colab.research.google.com/drive/1lyxb5gdD_YHKxNXLmD0poBU3G8bokWZ7) | A notebook that plots the distribution of income using statistics provided by the 2017 [American Community Survey](https://www.census.gov/programs-surveys/acs). The final result is a histogram charting the number of individuals in income brackets ranging from "0 to 10,000USD" up to "Above 200,000USD". |
12 | | -[`analyzing_obesity_prevalence.ipynb`](https://colab.research.google.com/drive/1_oZYWrrwO80DBaW0rIirTYHlfHCibXxY) | A notebook that analyzes the relationship between prevalence of obesity in 500 US Cities (as provided by the [CDC Wonder](https://wonder.cdc.gov/) dataset) to health and socio-economic indicators such as prevalence of high blood pressure and poverty rate. |
| 7 | + |
13 | 8 | [`Place Similarity with Data Commons.ipynb`](https://colab.research.google.com/drive/1t7dFDSpCT16QDkNuD933QgLUL9BOdCAS) | A notebook that identifies similar places given a place and one or more statistical variables from Data Commons. |
14 | 9 | [`Missing Data Imputation Tutorial.ipynb`](https://colab.research.google.com/drive/1S_rMCyRsgygd8sV-r8aLRPcKwZPFcEGb) | A notebook that analyzes the different types of time series holes and different methods of imputing those holes. |
15 | 10 | [`analyzing_genomic_data.ipynb`](https://colab.research.google.com/drive/1Io7EDr4LjfPLl_l2JYY8__WbfitfNlOf) | A notebook that analyzes genetic variants within RUNX1 (provided by multiple datasets from UCSC Genome Browser, NCBI/gene, and ClinVar). |
16 | 11 | [`Drug_Discovery_With_Data_Commons.ipynb`](https://colab.research.google.com/drive/1dSKYiRMn3mbDsInorQzYM0yk7sqv6fIV) | A notebook performing drug discovery by identifying novel applications of previously approved drugs using Biomedical Data Commons. |
17 | 12 | [`protein-charts.ipynb`](https://colab.research.google.com/drive/1Kh-ufqobdChZ2qQgEY0rdPA2_DBmOiSG) | A notebook summarizing various protein properties and interactions using graphical visualizations. |
18 | | -[`Superfund sites (basic)`](Accessing_Superfund_data_from_Data_Commons.ipynb) | A notebook that illustrates basic access to [Superfund sites](https://en.wikipedia.org/wiki/List_of_Superfund_sites) data in Data Commons. |
19 | | -[`Superfund sites (extended)`](Analyzing_SuperfundSites_with_Data_Commons.ipynb) | A notebook that includes extended analysis using [Superfund sites](https://en.wikipedia.org/wiki/List_of_Superfund_sites) data in Data Commons. |
20 | | - |
21 | | -## Maintenance |
22 | | - |
23 | | -To maintain up to date versions of these notebooks, developers can save a copy |
24 | | -of the above notebooks to a GitHub repository and PR this repository. Navigate |
25 | | -to `File > Save a copy in GitHub...` |
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