Merge pull request #50 from kabilar/main

Add links for Elements tutorials and docs

Author: kushalbakshi

mkdocs.yaml

@@ -7,7 +7,7 @@ repo_url: https://github.com/datajoint-company/datajoint-docs
 nav:
   - Welcome: index.md
   - Core:
-    - Overview: core/index.md
+    - core/index.md
     - Concepts: 
       - Principles: core/concepts/principles.md
       - Glossary: core/concepts/glossary.md

src/elements/index.md

@@ -53,15 +53,20 @@ Below are the projects that make up the family of open-source DataJoint Elements
 
     A data pipeline for miniscope calcium imaging.
 
+    [:octicons-arrow-right-24: Interactive tutorial](https://github.com/datajoint/workflow-miniscope#interactive-tutorial){:target="_blank"}
+
     [:octicons-arrow-right-24: Docs](./element-miniscope/)
 
 -   :fontawesome-brands-python:{ .lg .middle } **Element ZStack**
 
     ---
 
-    A data pipeline for segmenting volumetric microscopy data with Cellpose.
+    A data pipeline for segmenting volumetric microscopy data with Cellpose, uploading
+    to BossDB, and visualizing with Neuroglancer.
+
+    [:octicons-arrow-right-24: Interactive tutorial](https://github.com/datajoint/workflow-zstack#interactive-tutorial){:target="_blank"}
 
-    :octicons-arrow-right-24: New docs coming soon!
+    [:octicons-arrow-right-24: Docs](./element-zstack/)
 
 -   :fontawesome-brands-python:{ .lg .middle } **Element DeepLabCut**
 

src/elements/user-guide.md

@@ -4,9 +4,6 @@ The following document describes how to setup a development environment and conn
 a database so that you can use the DataJoint Elements to build and run a workflow on 
 your local machine. 
 
-If you'd rather run through similar tutorials in an online 
-Jupyter environment, please visit [CodeBook](https://codebook.datajoint.io/).
-
 Any of the DataJoint Elements can be combined together to create a workflow that matches
 your experimental setup. We have a number of [example workflows](#example-workflows)
 to get you started. Each focuses on a specific modality, but they can be adapted for
@@ -338,7 +335,6 @@ example data, you would ...
     Element and Workflow Array Ephys also support data recorded with 
     OpenEphys.
 
-
 ??? Note "Calcium Imaging: Click to expand details"
     - **Dataset**: workflow-array-calcium-imaging-test-set
     - **Revision**: 0_1_0a2
@@ -408,7 +404,6 @@ example data, you would ...
     - **Revision**: 0.0.0
     - **Size**: .3 GB
 
-
 #### Using Your Own Data
 
 Some of the workflows carry some assumptions about how your file directory will be 
@@ -738,7 +733,6 @@ provides all the informaiton required to set up a dedicated database.
         ```
     </details>
 
-
 ### DataJoint LabBook
 
 DataJoint LabBook is a graphical user interface to facilitate data entry for existing

src/index.md

@@ -38,7 +38,9 @@
 
      A cloud platform for automated analysis workflows. It relies on DataJoint Core and DataJoint Elements.
 
-     [:octicons-arrow-right-24: Learn more](https://datajoint.com/works){:target="_blank"}
+     [:octicons-arrow-right-24: Learn
+     more](https://datajoint.com/works){:target="_blank"}
+
      [:octicons-arrow-right-24: Sign-in](https://works.datajoint.com){:target="_blank"}
 
 </div>