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1 | 1 | # Guidelines for Adoption |
2 | 2 |
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3 | | -You have several options for adopting DataJoint workflows for your own experiments. |
| 3 | +DataJoint Elements offer flexible options for adoption, enabling researchers to |
| 4 | +seamlessly integrate them into their workflows. Below are the available paths for |
| 5 | +adoption based on your expertise and needs for your experiments. |
4 | 6 |
|
5 | | -## Adopt independently |
| 7 | +## Independent Adoption |
6 | 8 |
|
7 | | -DataJoint Elements are designed for adoption by independent users with moderate software |
8 | | -development skills, good understanding of DataJoint principles, and adequate IT |
9 | | -expertise or support. |
| 9 | +DataJoint Elements are designed for independent users who have: |
10 | 10 |
|
11 | | -If you have not yet used DataJoint, we recommend completing our online training |
12 | | -tutorials or attending a workshop either online or in person. Interactive tutorials |
13 | | -can be found on the [DataJoint |
14 | | -Tutorials](https://github.com/datajoint/datajoint-tutorials) repository. |
| 11 | +- Moderate software development skills. |
| 12 | +- A solid understanding of DataJoint principles. |
| 13 | +- Adequate IT expertise or support. |
15 | 14 |
|
16 | | -## Support from DataJoint |
| 15 | +If you are **new to DataJoint**, we recommend starting with these resources to build a |
| 16 | +strong foundation: |
17 | 17 |
|
18 | | -Our team provides support to labs to adopt DataJoint workflows in their research. |
| 18 | +### 1. Online Training Tutorials |
19 | 19 |
|
20 | | -This includes: |
| 20 | +Learn to set up your DataJoint pipeline with interactive tutorials hosted on GitHub |
| 21 | +Codespaces: |
21 | 22 |
|
22 | | -- User training |
23 | | -- Developer training |
24 | | -- Data and computation hosting |
25 | | - - on your premises |
26 | | - - using your own cloud accounts |
27 | | - - fully managed cloud hosting by DataJoint |
28 | | -- Workflow execution |
29 | | - - configuration and automation |
30 | | - - optional fully managed service by DataJoint |
31 | | -- Interfaces for data entry, export and publishing |
| 23 | +- **[DataJoint Tutorials Repository](https://github.com/datajoint/datajoint-tutorials):** |
| 24 | + A comprehensive set of tutorials to get started with DataJoint Python, organized in |
| 25 | + Jupyter notebooks. |
32 | 26 |
|
33 | | -These services may be subsidized by grant funding for qualified research groups. |
| 27 | +- **Element-Specific Interactive Tutorials:** Explore detailed guides for designing and |
| 28 | + interacting with specific Element pipelines: |
| 29 | + - [DataJoint Element Array Ephys](https://github.com/datajoint/element-array-ephys#interactive-tutorial) |
| 30 | + - [DataJoint Element Calcium Imaging](https://github.com/datajoint/element-calcium-imaging#interactive-tutorial) |
| 31 | + - [DataJoint Element DeepLabCut](https://github.com/datajoint/element-deeplabcut#interactive-tutorial) |
| 32 | + - [DataJoint Element Facemap](https://github.com/datajoint/element-facemap#interactive-tutorial) |
| 33 | + - [DataJoint Element MoSeq](https://github.com/datajoint/element-moseq#interactive-tutorial) |
| 34 | + - [DataJoint Element Miniscope](https://github.com/datajoint/element-miniscope#interactive-tutorial) |
| 35 | + - [DataJoint Element Optogenetics](https://github.com/datajoint/element-optogenetics#interactive-tutorial) |
| 36 | + - [DataJoint Element Zstack](https://github.com/datajoint/element-zstack#interactive-tutorial) |
| 37 | + - [DataJoint Element Electrode Localization](https://github.com/datajoint/element-electrode-localization#interactive-tutorial) |
| 38 | + - [DataJoint Element Visual Stimulus](https://github.com/datajoint/element-visual-stimulus#interactive-tutorial) |
| 39 | + |
| 40 | +### 2. Workshops |
| 41 | + |
| 42 | +Participate in [workshops and events](../../support-events.md) (online or in person) to |
| 43 | +gain hands-on experience and practical knowledge for implementing DataJoint workflows |
| 44 | +effectively. |
| 45 | + |
| 46 | +## Adoption with Support from DataJoint |
| 47 | + |
| 48 | +For institutions and labs requiring additional assistance, the DataJoint team offers |
| 49 | +tailored support services, including: |
| 50 | + |
| 51 | +### Training |
| 52 | + |
| 53 | +- **User Training:** Guidance for end-users to effectively utilize workflows. |
| 54 | +- **Developer Training:** Support for developers implementing or extending workflows. |
| 55 | + |
| 56 | +### Hosting and Infrastructure |
| 57 | + |
| 58 | +- **Data and Computation Hosting:** |
| 59 | + - On-premises setups for your institution or lab. |
| 60 | + - Integration with your existing cloud accounts. |
| 61 | + - Fully managed cloud hosting by DataJoint. |
| 62 | + |
| 63 | +### Workflow Execution |
| 64 | + |
| 65 | +- **Configuration and Automation:** Assistance with setting up and automating workflows. |
| 66 | +- **Fully Managed Services:** Optional services to oversee workflow execution and |
| 67 | + management entirely. |
| 68 | + |
| 69 | +### Interfaces |
| 70 | + |
| 71 | +- **Data Entry, Export, and Publishing:** Streamlined interfaces to efficiently manage |
| 72 | + and share your research data. |
| 73 | + |
| 74 | +### Subsidized Support |
| 75 | + |
| 76 | +Qualified research groups may be eligible for subsidized services through grant funding. |
| 77 | +Contact the DataJoint team to explore funding options and determine your eligibility. |
| 78 | + |
| 79 | +By choosing the adoption path that best suits your lab's expertise and requirements, you |
| 80 | +can leverage DataJoint Elements to optimize your research workflows. For additional |
| 81 | +information or assistance, please contact the DataJoint team at [email protected]. |
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