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@dimitri-yatsenko dimitri-yatsenko commented Jul 28, 2025

@github-actions github-actions bot added enhancement Indicates new improvements documentation Issues related to documentation labels Jul 28, 2025

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@dimitri-yatsenko dimitri-yatsenko requested a review from Copilot July 28, 2025 22:15

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@dimitri-yatsenko dimitri-yatsenko requested a review from Copilot July 29, 2025 02:49
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Pull Request Overview

This pull request updates the DevContainer configuration and makes various maintenance updates to the project. The main purpose is to modernize the development environment and documentation while adding a new contributor to the project.

  • Updated DevContainer configuration to use bookworm distribution instead of buster
  • Added comprehensive documentation for the three-part make pattern for transaction-friendly computations
  • Updated various development tools and configurations to newer versions

Reviewed Changes

Copilot reviewed 6 out of 6 changed files in this pull request and generated 1 comment.

Show a summary per file
File Description
pyproject.toml Added new author "Thinh Nguyen" to the project contributors
docs/src/compute/populate.md Added extensive documentation for three-part make pattern for long computations
Dockerfile Updated default Python version from 3.9 to 3.11
CHANGELOG.md Added deprecation notice redirecting to GitHub releases page
.pre-commit-config.yaml Updated versions for isort, black, and flake8 tools
.devcontainer/docker-compose.yml Updated to use bookworm distribution and removed deprecated version field
Comments suppressed due to low confidence (1)

.pre-commit-config.yaml:30

  • Black version 25.1.0 does not exist. As of January 2025, the latest stable version of Black is 24.x.x series. Please verify the correct version number.
  rev: 25.1.0 # matching versions in pyproject.toml and github actions

# Expensive computation that could take hours
import time
start_time = time.time()
result = complex_image_analysis(image_data)
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Copilot AI Jul 29, 2025

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The variable image_data is not defined in this scope. It should be fetched_data[0] since fetched_data is the tuple returned from the yield statement.

Suggested change
result = complex_image_analysis(image_data)
result = complex_image_analysis(fetched_data[0])

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@dimitri-yatsenko dimitri-yatsenko changed the title update devcontainer config update documentation and devcontainer Jul 29, 2025
@ttngu207 ttngu207 merged commit 701f5ad into datajoint:master Jul 29, 2025
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IMPR: Documentation for populate generator

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