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1 parent f6ab618 commit 8d7d7f7Copy full SHA for 8d7d7f7
workflow/Snakefile
@@ -141,7 +141,7 @@ rule unweighted_skat:
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"""
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export PATH=$PATH:{params.plink_path}
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mkdir -p {params.output_dir}
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- seq 1 22 | parallel -j {threads} --verbose Rscript scripts/skat_unweighted.R {params.genotype_prefix} {input.gene_regions} {params.genotype_path} {{}} {params.output_dir}
+ seq 1 22 | parallel {threads} --verbose Rscript scripts/skat_unweighted.R {params.genotype_prefix} {input.gene_regions} {params.genotype_path} {{}} {params.output_dir}
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# Rule: merge_unweighted_results
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