diff --git a/source/module_elecstate/potentials/potential_new.cpp b/source/module_elecstate/potentials/potential_new.cpp
index e90d080fd4..48b90f65b4 100644
--- a/source/module_elecstate/potentials/potential_new.cpp
+++ b/source/module_elecstate/potentials/potential_new.cpp
@@ -46,7 +46,7 @@ Potential::~Potential()
         }
         this->components.clear();
     }
-    if (PARAM.inp.device == "gpu") {
+    if (PARAM.inp.basis_type == "pw" && PARAM.inp.device == "gpu") {
         if (PARAM.inp.precision == "single") {
             delmem_sd_op()(gpu_ctx, s_veff_smooth);
             delmem_sd_op()(gpu_ctx, s_vofk_smooth);
@@ -129,7 +129,7 @@ void Potential::allocate()
         this->vofk_smooth.create(PARAM.inp.nspin, nrxx_smooth);
         ModuleBase::Memory::record("Pot::vofk_smooth", sizeof(double) * PARAM.inp.nspin * nrxx_smooth);
     }
-    if (PARAM.inp.device == "gpu") {
+    if (PARAM.inp.basis_type == "pw" && PARAM.inp.device == "gpu") {
         if (PARAM.inp.precision == "single") {
             resmem_sd_op()(gpu_ctx, s_veff_smooth, PARAM.inp.nspin * nrxx_smooth);
             resmem_sd_op()(gpu_ctx, s_vofk_smooth, PARAM.inp.nspin * nrxx_smooth);
@@ -177,7 +177,7 @@ void Potential::update_from_charge(const Charge*const chg, const UnitCell*const
     }
 #endif
 
-    if (PARAM.inp.device == "gpu") {
+    if (PARAM.inp.basis_type == "pw" && PARAM.inp.device == "gpu") {
         if (PARAM.inp.precision == "single") {
             castmem_d2s_h2d_op()(gpu_ctx,
                                  cpu_ctx,
diff --git a/source/module_esolver/esolver_fp.cpp b/source/module_esolver/esolver_fp.cpp
index 7bb5c83f26..4b87337235 100644
--- a/source/module_esolver/esolver_fp.cpp
+++ b/source/module_esolver/esolver_fp.cpp
@@ -17,11 +17,16 @@ namespace ModuleESolver
 ESolver_FP::ESolver_FP()
 {
     // pw_rho = new ModuleBase::PW_Basis();
-    pw_rho = new ModulePW::PW_Basis_Big(PARAM.inp.device, PARAM.inp.precision);
-
+    // LCAO basis doesn't support GPU acceleration on FFT currently
+    std::string fft_device = PARAM.inp.device;
+    if(PARAM.inp.basis_type == "lcao")
+    {
+        fft_device = "cpu";
+    }
+    pw_rho = new ModulePW::PW_Basis_Big(fft_device, PARAM.inp.precision);
     if ( PARAM.globalv.double_grid)
     {
-        pw_rhod = new ModulePW::PW_Basis_Big(PARAM.inp.device, PARAM.inp.precision);
+        pw_rhod = new ModulePW::PW_Basis_Big(fft_device, PARAM.inp.precision);
     }
     else
     {
diff --git a/source/module_esolver/esolver_ks.cpp b/source/module_esolver/esolver_ks.cpp
index 78163a9301..f57ff84d53 100644
--- a/source/module_esolver/esolver_ks.cpp
+++ b/source/module_esolver/esolver_ks.cpp
@@ -57,7 +57,13 @@ ESolver_KS<T, Device>::ESolver_KS()
 
     // pw_rho = new ModuleBase::PW_Basis();
     // temporary, it will be removed
-    pw_wfc = new ModulePW::PW_Basis_K_Big(PARAM.inp.device, PARAM.inp.precision);
+    std::string fft_device = PARAM.inp.device;
+    // LCAO basis doesn't support GPU acceleration on FFT currently
+    if(PARAM.inp.basis_type == "lcao")
+    {
+        fft_device = "cpu";
+    }
+    pw_wfc = new ModulePW::PW_Basis_K_Big(fft_device, PARAM.inp.precision);
     ModulePW::PW_Basis_K_Big* tmp = static_cast<ModulePW::PW_Basis_K_Big*>(pw_wfc);
 
     // should not use INPUT here, mohan 2024-05-12
diff --git a/source/module_hamilt_pw/hamilt_pwdft/structure_factor.cpp b/source/module_hamilt_pw/hamilt_pwdft/structure_factor.cpp
index 163d6ca210..dd3663cbd0 100644
--- a/source/module_hamilt_pw/hamilt_pwdft/structure_factor.cpp
+++ b/source/module_hamilt_pw/hamilt_pwdft/structure_factor.cpp
@@ -16,12 +16,16 @@
 
 Structure_Factor::Structure_Factor()
 {
-
+    // LCAO basis doesn't support GPU acceleration on this function currently.
+    if(PARAM.inp.basis_type == "pw")
+    {
+        this->device = PARAM.inp.device;
+    }
 }
 
 Structure_Factor::~Structure_Factor()
 {
-    if (PARAM.inp.device == "gpu") {
+    if (device == "gpu") {
         if (PARAM.inp.precision == "single") {
             delmem_cd_op()(gpu_ctx, this->c_eigts1);
             delmem_cd_op()(gpu_ctx, this->c_eigts2);
@@ -145,7 +149,7 @@ void Structure_Factor::setup_structure_factor(UnitCell* Ucell, const ModulePW::P
             inat++;
         }
     }
-    if (PARAM.inp.device == "gpu") {
+    if (device == "gpu") {
         if (PARAM.inp.precision == "single") {
             resmem_cd_op()(gpu_ctx, this->c_eigts1, Ucell->nat * (2 * rho_basis->nx + 1));
             resmem_cd_op()(gpu_ctx, this->c_eigts2, Ucell->nat * (2 * rho_basis->ny + 1));
diff --git a/source/module_hamilt_pw/hamilt_pwdft/structure_factor.h b/source/module_hamilt_pw/hamilt_pwdft/structure_factor.h
index 23b08c253e..5fc4e8a129 100644
--- a/source/module_hamilt_pw/hamilt_pwdft/structure_factor.h
+++ b/source/module_hamilt_pw/hamilt_pwdft/structure_factor.h
@@ -56,5 +56,6 @@ class Structure_Factor
     std::complex<float> * c_eigts1 = nullptr, * c_eigts2 = nullptr, * c_eigts3 = nullptr;
     std::complex<double> * z_eigts1 = nullptr, * z_eigts2 = nullptr, * z_eigts3 = nullptr;
     const ModulePW::PW_Basis* rho_basis = nullptr;
+    std::string device = "cpu";
 };
 #endif //PlaneWave class