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I find this is the version problem. I have solved it. Thank you. |
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Hi, I use the Docker images for the deepMD. I got the following error message when I try to train the water example for the tutorial:
/opt/deepmd-kit/lib/python3.8/site-packages/tensorflow/python/ops/random_ops.py:285: SyntaxWarning: "is" with a literal. Did you mean "==" ?
minval_is_zero = minval is 0 # pylint: disable=literal-comparison
/opt/deepmd-kit/lib/python3.8/site-packages/tensorflow/python/ops/random_ops.py:286: SyntaxWarning: "is" with a literal. Did you mean "==" ?
maxval_is_one = maxval is 1 # pylint: disable=literal-comparison
/opt/deepmd-kit/lib/python3.8/site-packages/tensorflow/python/ops/ragged/ragged_batch_gather_with_default_op.py:84: SyntaxWarning: "is not " with a literal. Did you mean "!="?
if (default_value.shape.ndims is not 0
/opt/deepmd-kit/lib/python3.8/site-packages/tensorflow/python/ops/ragged/ragged_batch_gather_with_default_op.py:85: SyntaxWarning: "is not " with a literal. Did you mean "!="?
and default_value.shape.ndims is not 1):
WARNING:tensorflow:From /opt/deepmd-kit/lib/python3.8/site-packages/tensorflow/python/compat/v2_compat.py:96: disable_resource_variables (from tensorflow.python.ops.variable_scope) is deprecated and will be removed in a future version.
Instructions for updating:
non-resource variables are not supported in the long term
WARNING:root:Environment variable KMP_BLOCKTIME is empty. Use the default value 0
WARNING:root:Environment variable KMP_AFFINITY is empty. Use the default value granularity=fine,verbose,compact,1,0
DEEPMD: _____ _____ __ __ _____ _ _ _
DEEPMD: | __ \ | __ \ | / || __ \ | | (_)| |
DEEPMD: | | | | ___ ___ | |__) || \ / || | | | ______ | | __ _ | |_
DEEPMD: | | | | / _ \ / _ | / | |/| || | | ||___|| |/ /| || __|
DEEPMD: | |__| || _/| /| | | | | || || | | < | || |
DEEPMD: |/ _| _||| || |_||____/ ||_|| __|
DEEPMD:
DEEPMD: Please read and cite:
DEEPMD: Wang, Zhang, Han and E, Comput.Phys.Comm. 228, 178-184 (2018)
DEEPMD:
DEEPMD: ---Summary of the training---------------------------------------
DEEPMD: installed to: /tmp/pip-req-build-ui_bai_a/_skbuild/linux-x86_64-3.8/cmake-install
DEEPMD: source : v1.2.0
DEEPMD: source brach: HEAD
DEEPMD: source commit: 567bcff
DEEPMD: source commit at: 2020-05-23 12:44:21 -0400
DEEPMD: build float prec: double
DEEPMD: build with tf inc: /opt/deepmd-kit/lib/python3.8/site-packages/tensorflow/include;/opt/deepmd-kit/lib/python3.8/site-packages/tensorflow/include
DEEPMD: build with tf lib:
DEEPMD: running on: compute1-exec-120.ris.wustl.edu
DEEPMD: CUDA_VISIBLE_DEVICES: []
DEEPMD: num_intra_threads: 0
DEEPMD: num_inter_threads: 0
DEEPMD: -----------------------------------------------------------------
DEEPMD:
Traceback (most recent call last):
File "/opt/deepmd-kit/bin/dp", line 10, in
sys.exit(main())
File "/opt/deepmd-kit/lib/python3.8/site-packages/deepmd/main.py", line 66, in main
train(args)
File "/opt/deepmd-kit/lib/python3.8/site-packages/deepmd/train.py", line 81, in train
_do_work(jdata, run_opt)
File "/opt/deepmd-kit/lib/python3.8/site-packages/deepmd/train.py", line 85, in _do_work
model = NNPTrainer (jdata, run_opt = run_opt)
File "/opt/deepmd-kit/lib/python3.8/site-packages/deepmd/Trainer.py", line 48, in init
self._init_param(jdata)
File "/opt/deepmd-kit/lib/python3.8/site-packages/deepmd/Trainer.py", line 67, in _init_param
raise RuntimeError('unknow model type ' + descrpt_type)
RuntimeError: unknow model type se_e2_a
Any comments or suggestion are welcome.
Thank you.
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