Triclinic box simulation losing atom #5028
Unanswered
stfalxndria
asked this question in
Q&A
Replies: 0 comments
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Uh oh!
There was an error while loading. Please reload this page.
-
Hi all,
I have trained an MLIP for my MOF structure filled with water. My model had a pretty decent RMSE for both energy (1.34e-04) and forces (4.47e-02) and I even tested my initial structure using dp test and the RMSE was good (in my opinion). However when I run my MLMD simulation, my KE is extremely high and I lose an atom at step 50. I am wondering if this has anything to do with the fact that the structure is a triclinic (90 122 90) since I have replicated the same steps and method employed for another structure that is orthorombic and everything worked well. I have tried with both LAMMPS and GROMACS and both of them I have this issue for this specific structure and not the orthorombic structure.
I have attached some input and outputs that I thought were relevant.
thank you in advance!
lammps_MLMD.zip
Beta Was this translation helpful? Give feedback.
All reactions