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lines changed Original file line number Diff line number Diff line change @@ -15,16 +15,15 @@ jobs:
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- uses : actions/checkout@v2
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# set up conda
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- name : Set up Python ${{ matrix.python-version }}
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- uses : conda-incubator /setup-miniconda@v2
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+ uses : actions /setup-python@v4
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with :
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- auto-activate-base : true
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- activate-environment : " "
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+ python-version : ${{ matrix.python-version }}
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# install rdkit and openbabel
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- name : Install rdkit
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- run : conda create -c conda-forge -n my- rdkit-env python=${{ matrix.python-version }} rdkit openbabel;
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+ run : python -m pip install rdkit openbabel-wheel
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- name : Install dependencies
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- run : source $CONDA/bin/activate my-rdkit-env && pip install .[amber,ase,pymatgen] coverage codecov
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+ run : python -m pip install .[amber,ase,pymatgen] coverage codecov
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- name : Test
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- run : source $CONDA/bin/activate my-rdkit-env && cd tests && coverage run --source=../dpdata -m unittest && cd .. && coverage combine tests/.coverage && coverage report
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+ run : cd tests && coverage run --source=../dpdata -m unittest && cd .. && coverage combine tests/.coverage && coverage report
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- name : Run codecov
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- run : source $CONDA/bin/activate my-rdkit-env && codecov
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+ run : codecov
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